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RPS28
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  • RPS28
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:143.0 nTPM
FANTOM5:6.8 Scaled Tags Per Million
Pig:378.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA047132
Glial cells Not detected
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 143.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 143.0
Samples: 246

Max nTPM: 313.7
Min nTPM: 48.2
Std nTPM: 46.4
Median nTPM: 138.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 313.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 308.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 301.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 290.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 284.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 252.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 245.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 240.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 239.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 229.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 228.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 228.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 227.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 222.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 221.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 220.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 217.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 216.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 213.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 212.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 211.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 210.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 207.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 206.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 204.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 200.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 198.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 198.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 197.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 195.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 194.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 190.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 190.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 188.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 188.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 188.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 186.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 185.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 184.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 182.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 182.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 181.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 180.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 180.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 179.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 178.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 178.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 178.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 175.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 175.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 174.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 174.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 173.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 171.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 170.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 170.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 169.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 169.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 169.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 167.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 167.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 166.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 166.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 166.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 164.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 164.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 163.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 163.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 162.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 162.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 160.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 160.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 159.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 159.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 159.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 159.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 158.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 158.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 158.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 157.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 156.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 156.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 154.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 154.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 153.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 153.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 153.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 153.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 153.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 152.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 152.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 152.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 152.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 152.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 151.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 151.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 151.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 151.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 150.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 150.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 150.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 148.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 148.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 148.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 148.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 147.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 147.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 147.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 146.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 146.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 145.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 144.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 144.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 144.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 144.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 142.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 142.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 141.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 141.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 140.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 140.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 139.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 138.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 138.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 138.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 137.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 137.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 137.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 135.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 135.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 135.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 135.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 134.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 134.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 134.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 133.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 131.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 131.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 131.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 131.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 129.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 129.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 129.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 127.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 127.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 127.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 127.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 126.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 126.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 126.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 126.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 126.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 126.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 126.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 126.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 125.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 124.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 124.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 123.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 123.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 122.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 122.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 122.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 121.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 121.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 120.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 118.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 117.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 116.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 116.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 115.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 115.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 115.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 114.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 114.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 113.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 113.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 113.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 113.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 113.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 113.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 112.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 112.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 112.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 112.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 111.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 111.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 110.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 109.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 108.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 108.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 108.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 107.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 106.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 105.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 105.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 104.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 104.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 104.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 102.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 102.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 100.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 100.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 99.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 99.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 99.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 99.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 98.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 98.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 97.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 97.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 97.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 95.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 95.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 95.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 92.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 91.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 91.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 87.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 87.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 87.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 86.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 86.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 85.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 85.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 84.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 83.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 83.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 83.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 80.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 80.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 79.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 79.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 78.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 77.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 74.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 74.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 74.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 74.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 74.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 72.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 66.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 55.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 55.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 49.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 48.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 6.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 6.8
FF:10164-103B2 76 years, female 6.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 378.5
Pig sample Sample description nTPM
Caudate
nTPM: 378.4
Samples: 4

Max nTPM: 414.8
Min nTPM: 344.8
Sample A Female 344.8
Sample B Female 402.4
Sample C Male 414.8
Sample D Male 351.7

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