PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:1472.5 nTPM
HPA:1472.5 nTPM
FANTOM5:1381.6 Scaled Tags Per Million
Pig:830.8 nTPM
Mouse:1260.2 nTPM
Allen mouse:4.9 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 1472.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 1234.0
2301 Female, age 85, both hemispheres 1406.4
2090 Male, age 80, both hemispheres 1274.5
2188 Female, age 91, both hemispheres 1248.3
1984 Male, age 76, both hemispheres 1006.6
Area postrema
nTPM: 1306.0
2799 Male, age 61, both hemispheres 1530.2
2306 Male, age 80, both hemispheres 1350.9
2054 Male, age 76, both hemispheres 1037.0
Cuneate nuclei
nTPM: 1221.7
2376 Male, age 61, both hemispheres 1286.2
2381 Male, age 80, both hemispheres 1279.0
2131 Male, age 76, both hemispheres 1099.7
Dorsal cochlear nucleus
nTPM: 1184.9
2802 Male, age 74, right hemisphere 1269.0
2378 Male, age 80, both hemispheres 1203.7
2187 Female, age 91, both hemispheres 1187.5
2370 Male, age 61, both hemispheres 1137.8
2058 Male, age 76, both hemispheres 1126.7
Dorsal medullary reticular nucleus
nTPM: 1185.7
2373 Male, age 61, both hemispheres 1269.9
2088 Male, age 76, both hemispheres 1171.1
2040 Female, age 85, both hemispheres 1116.1
Dorsal motor vagal complex
nTPM: 1153.6
2797 Male, age 61, both hemispheres 1646.1
2185 Male, age 76, both hemispheres 1280.2
2643 Male, age 74, both hemispheres 1143.4
2807 Female, age 85, both hemispheres 1098.5
2844 Male, age 55, unknown 1041.1
2000 Male, age 74, unknown 1034.0
2813 Female, age 72, unknown 1020.4
2133 Female, age 91, both hemispheres 965.0
Dorsal tegmental nucleus
nTPM: 1102.2
2083 Male, age 80, both hemispheres 1210.5
2326 Male, age 74, both hemispheres 1136.3
1936 Male, age 76, left hemisphere 1117.6
2358 Male, age 61, both hemispheres 944.4
Dorsolateral tegmental area
nTPM: 1075.8
2654 Male, age 80, both hemispheres 1229.9
2751 Female, age 85, both hemispheres 1186.6
2337 Male, age 61, both hemispheres 1009.0
2141 Male, age 76, both hemispheres 980.3
2360 Male, age 74, both hemispheres 973.2
Gigantocellular reticular nuclei, medullary
nTPM: 1152.3
2314 Male, age 61, both hemispheres 1594.6
2387 Female, age 91, both hemispheres 1155.7
1876 Female, age 85, both hemispheres 1136.4
2310 Male, age 80, both hemispheres 1094.2
2022 Male, age 76, right hemisphere 1013.5
2462 Male, age 74, both hemispheres 919.4
Gigantocellular reticular nuclei, pars
nTPM: 1106.9
2336 Male, age 61, both hemispheres 1170.0
2330 Male, age 80, both hemispheres 1138.5
2706 Male, age 80, both hemispheres 1132.9
2084 Female, age 85, both hemispheres 1128.6
2168 Male, age 76, both hemispheres 964.6
Inferior olive
nTPM: 1379.8
2178 Male, age 61, both hemispheres 1452.3
2085 Female, age 85, both hemispheres 1433.4
2379 Male, age 80, both hemispheres 1362.1
2628 Female, age 91, both hemispheres 1352.3
2563 Male, age 74, both hemispheres 1299.2
Kolliker-Fuse nucleus
nTPM: 1197.5
2315 Male, age 76, right hemisphere 1263.2
2793 Female, age 91, left hemisphere 1221.7
2163 Male, age 80, both hemispheres 1107.7
Lateral lemniscal nuclei
nTPM: 1009.4
2320 Female, age 91, left hemisphere 1061.5
2169 Male, age 76, both hemispheres 1023.2
2746 Female, age 85, left hemisphere 1008.3
2453 Male, age 74, right hemisphere 986.5
2036 Male, age 80, both hemispheres 967.6
Lateral medullary reticular nucleus
nTPM: 1300.2
2374 Male, age 61, both hemispheres 1427.1
2852 Male, age 80, both hemispheres 1412.8
2804 Female, age 91, both hemispheres 1335.3
2190 Female, age 85, both hemispheres 1285.7
2305 Male, age 74, both hemispheres 1241.7
2044 Male, age 76, both hemispheres 1098.4
Lateral parabrachial nucleus
nTPM: 1163.8
2792 Male, age 76, both hemispheres 1463.4
2013 Male, age 80, both hemispheres 1137.0
2139 Female, age 85, right hemisphere 1047.6
2790 Male, age 61, both hemispheres 1007.3
Lateral vestibular nucleus
nTPM: 1211.1
2311 Male, age 80, both hemispheres 1282.0
2184 Male, age 76, both hemispheres 1140.2
Locus coeruleus
nTPM: 927.5
2162 Male, age 80, both hemispheres 996.7
2720 Male, age 74, both hemispheres 992.7
2317 Female, age 72, unknown 956.3
2123 Female, age 91, both hemispheres 913.7
1980 Male, age 76, both hemispheres 894.9
2788 Male, age 74, unknown 872.1
2014 Male, age 55, unknown 866.1
Medial olivary nucleus
nTPM: 1433.2
1943 Male, age 61, both hemispheres 1617.1
1962 Male, age 76, both hemispheres 1437.1
2138 Female, age 91, both hemispheres 1431.2
2851 Male, age 80, both hemispheres 1247.6
Medial parabrachial nucleus
nTPM: 1152.8
2170 Female, age 91, both hemispheres 1259.9
2463 Female, age 85, right hemisphere 1188.3
2786 Male, age 76, both hemispheres 1129.1
2854 Male, age 80, both hemispheres 1128.0
2156 Male, age 61, both hemispheres 1058.9
Medial periolivary nuclei
nTPM: 1042.7
2081 Male, age 80, both hemispheres 1178.2
2458 Female, age 91, both hemispheres 1091.8
2063 Male, age 76, both hemispheres 1022.8
2791 Male, age 74, right hemisphere 1013.9
2171 Female, age 85, both hemispheres 906.7
Medial vestibular nucleus
nTPM: 1135.4
2624 Male, age 61, both hemispheres 1246.9
2803 Female, age 91, both hemispheres 1213.0
2801 Male, age 74, both hemispheres 1196.8
2093 Male, age 80, both hemispheres 1155.4
2743 Female, age 85, both hemispheres 1048.2
2134 Male, age 76, both hemispheres 952.0
Motor facial nucleus
nTPM: 1091.2
2126 Male, age 61, both hemispheres 1235.1
2697 Female, age 85, both hemispheres 1161.2
2795 Female, age 91, both hemispheres 1102.7
2365 Male, age 74, right hemisphere 1017.9
2327 Male, age 80, both hemispheres 1015.9
2062 Male, age 76, both hemispheres 1014.2
Motor hypoglossal nucleus
nTPM: 1083.5
2182 Male, age 80, both hemispheres 1200.3
2125 Female, age 91, both hemispheres 1166.6
2132 Female, age 85, both hemispheres 1152.5
2461 Male, age 61, both hemispheres 975.7
2277 Male, age 76, both hemispheres 922.3
Motor trigeminal nucleus
nTPM: 1088.3
2321 Female, age 91, both hemispheres 1180.7
2309 Male, age 76, both hemispheres 1147.1
2560 Male, age 74, both hemispheres 1067.2
2335 Male, age 61, both hemispheres 1060.1
2079 Male, age 80, both hemispheres 986.3
Nuclei of the trapezoid body
nTPM: 1059.5
2166 Male, age 80, both hemispheres 1188.9
2368 Female, age 91, both hemispheres 1099.7
2159 Male, age 61, both hemispheres 1084.8
1983 Male, age 76, both hemispheres 1050.9
2735 Female, age 85, both hemispheres 873.2
Nucleus ambiguus
nTPM: 1282.3
2071 Male, age 76, both hemispheres 1451.1
2096 Female, age 85, both hemispheres 1113.5
Nucleus cuneatus
nTPM: 1320.0
2380 Male, age 80, both hemispheres 1481.0
2808 Female, age 85, both hemispheres 1419.2
2805 Female, age 91, both hemispheres 1318.1
2100 Male, age 76, both hemispheres 1296.6
2564 Male, age 74, both hemispheres 1258.6
2562 Male, age 61, both hemispheres 1146.8
Nucleus gracilis
nTPM: 1354.1
2382 Male, age 80, both hemispheres 1423.8
2299 Female, age 85, both hemispheres 1341.5
2627 Male, age 74, both hemispheres 1296.9
Nucleus raphe magnus
nTPM: 984.6
2051 Male, age 76, both hemispheres 1109.2
2328 Male, age 80, both hemispheres 1070.4
2459 Female, age 91, both hemispheres 1037.2
2455 Male, age 74, both hemispheres 966.2
2160 Male, age 61, both hemispheres 892.5
2172 Female, age 85, both hemispheres 832.2
Nucleus raphe obscurus
nTPM: 1472.5
2142 Male, age 76, midline 1532.2
2845 Female, age 85, midline 1473.6
2800 Male, age 61, midline 1411.6
Nucleus raphe pallidus
nTPM: 1281.3
2145 Male, age 76, midline 1445.9
1924 Male, age 61, midline 1280.8
2183 Male, age 80, midline 1117.2
Nucleus tractus solitarii
nTPM: 921.3
2191 Female, age 85, both hemispheres 975.2
2656 Male, age 76, both hemispheres 935.9
2307 Male, age 80, both hemispheres 900.1
2144 Female, age 91, right hemisphere 874.2
Paramedian reticular nucleus
nTPM: 1081.1
2052 Male, age 76, both hemispheres 1152.1
2057 Male, age 80, both hemispheres 1115.5
2313 Male, age 61, both hemispheres 1050.8
2050 Female, age 85, both hemispheres 1006.0
Parvicellular reticular nuclei
nTPM: 1121.4
2095 Male, age 76, both hemispheres 1245.5
2119 Male, age 80, both hemispheres 1148.2
2558 Male, age 74, both hemispheres 970.6
Parvicellular reticular nuclei, medullary
nTPM: 1055.5
2189 Female, age 91, both hemispheres 1081.2
2091 Female, age 85, both hemispheres 1060.1
2181 Male, age 80, left hemisphere 1025.3
Peritrigeminal nucleus
nTPM: 1226.2
2136 Male, age 76, both hemispheres 1278.2
2067 Female, age 85, both hemispheres 1229.5
2179 Male, age 61, both hemispheres 1170.7
Pontine nuclei
nTPM: 1046.7
2319 Female, age 91, both hemispheres 1194.1
2115 Male, age 80, left hemisphere 1150.4
1968 Male, age 76, left hemisphere 1098.2
2454 Male, age 74, left hemisphere 1073.1
2109 Female, age 72, unknown 1067.2
1863 Male, age 55, unknown 972.3
2787 Female, age 85, both hemispheres 916.0
2727 Male, age 61, right hemisphere 902.0
Pontine raphe nucleus
nTPM: 996.6
2853 Male, age 76, midline 1052.1
2122 Female, age 85, midline 941.1
Posteroventral cochlear nucleus
nTPM: 1237.2
2135 Female, age 91, both hemispheres 1404.9
2341 Male, age 80, both hemispheres 1381.0
2371 Male, age 61, both hemispheres 1279.6
2070 Male, age 76, both hemispheres 1085.9
2752 Female, age 85, both hemispheres 1034.7
Prepositus hypoglossal nucleus
nTPM: 1150.1
2855 Female, age 85, right hemisphere 1303.2
2086 Male, age 80, both hemispheres 997.0
Principal sensory trigeminal nucleus
nTPM: 1066.9
2324 Male, age 76, both hemispheres 1188.1
2367 Female, age 91, left hemisphere 1142.7
2158 Male, age 61, both hemispheres 992.3
2008 Male, age 80, left hemisphere 944.6
Reticular pontine nucleus, caudal
nTPM: 1075.6
2092 Male, age 76, both hemispheres 1132.8
2559 Male, age 74, both hemispheres 1127.5
2457 Female, age 91, both hemispheres 1089.2
2332 Male, age 80, right hemisphere 952.9
Reticular pontine nucleus, oral
nTPM: 1099.1
1939 Male, age 80, both hemispheres 1157.3
2167 Male, age 76, both hemispheres 1144.7
2366 Female, age 91, both hemispheres 1140.0
2361 Male, age 74, both hemispheres 1028.3
2012 Female, age 85, both hemispheres 1025.2
Reticulotegmental nucleus
nTPM: 1085.3
2322 Female, age 91, both hemispheres 1157.7
2333 Male, age 80, both hemispheres 1093.8
2452 Male, age 74, both hemispheres 1091.9
2325 Male, age 76, both hemispheres 997.7
Spinal trigeminal nucleus, caudal
nTPM: 1163.8
2312 Male, age 61, both hemispheres 1277.1
2308 Male, age 80, both hemispheres 1241.7
2447 Male, age 76, both hemispheres 1166.1
2642 Male, age 74, both hemispheres 1088.2
2390 Female, age 91, both hemispheres 1046.1
Spinal trigeminal nucleus, interpolar
nTPM: 1036.8
2389 Female, age 91, both hemispheres 1064.0
2033 Male, age 80, both hemispheres 1057.3
2625 Male, age 61, both hemispheres 1038.5
2066 Male, age 76, right hemisphere 1012.3
2386 Female, age 85, both hemispheres 1011.9
Spinal trigeminal nucleus, oral
nTPM: 1047.8
2164 Male, age 80, both hemispheres 1134.2
1978 Male, age 76, both hemispheres 1032.0
2737 Female, age 85, both hemispheres 977.2
Spinal vestibular nucleus
nTPM: 1179.2
2806 Female, age 85, both hemispheres 1286.0
2384 Male, age 74, both hemispheres 1261.1
2748 Male, age 76, both hemispheres 1200.4
2796 Male, age 61, both hemispheres 1164.2
2780 Male, age 80, both hemispheres 1085.3
2186 Female, age 91, both hemispheres 1078.3
Subcoeruleus area
nTPM: 1068.0
2369 Female, age 85, left hemisphere 1251.5
2451 Male, age 74, both hemispheres 1073.7
2089 Male, age 76, left hemisphere 1043.8
1958 Male, age 80, both hemispheres 1030.0
2323 Female, age 91, left hemisphere 941.0
Superior olive
nTPM: 1070.5
2020 Male, age 76, both hemispheres 1182.9
2329 Male, age 80, right hemisphere 1118.3
2561 Female, age 91, both hemispheres 1099.3
2364 Male, age 74, right hemisphere 1007.9
1875 Female, age 85, both hemispheres 944.2
Superior vestibular nucleus
nTPM: 1115.8
2061 Male, age 76, both hemispheres 1156.9
2015 Male, age 80, both hemispheres 1145.5
2383 Male, age 74, both hemispheres 1045.1
Ventral medullary reticular nucleus
nTPM: 1282.2
2372 Male, age 61, both hemispheres 1417.5
2060 Male, age 76, both hemispheres 1146.9
Ventral periolivary nuclei
nTPM: 1039.2
2023 Male, age 76, both hemispheres 1149.4
2165 Male, age 80, both hemispheres 1056.4
2794 Female, age 91, left hemisphere 1010.3
2130 Female, age 85, both hemispheres 940.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1206.4
2180 Male, age 61, both hemispheres 1288.7
2118 Male, age 80, both hemispheres 1259.6
2302 Female, age 91, both hemispheres 1256.2
1986 Male, age 76, both hemispheres 1154.3
2741 Female, age 85, both hemispheres 1073.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 1051.0
2456 Female, age 91, both hemispheres 1139.6
2840 Female, age 85, both hemispheres 1082.8
2161 Male, age 80, both hemispheres 1082.1
1959 Male, age 76, both hemispheres 1064.0
2359 Male, age 61, both hemispheres 972.5
2449 Male, age 74, both hemispheres 965.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 1381.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1246.2
FF:10182-103D2 60 years, female 1329.8
FF:10165-103B3 76 years, female 1162.6
Medulla oblongata
Scaled Tags Per Million: 1381.6
FF:10038-101F2 18-64 years, mixed 1864.4
FF:10155-103A2 76 years, female 1296.7
FF:10174-103C3 60 years, female 983.8
Pons
Scaled Tags Per Million: 1066.8
FF:10033-101E6 18-54 years, mixed 1066.8

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 830.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 830.8
Samples: 4

Max nTPM: 1025.9
Min nTPM: 662.3
Sample A Female 662.3
Sample B Female 695.4
Sample C Male 939.7
Sample D Male 1025.9
Pons
nTPM: 599.6
Samples: 4

Max nTPM: 888.1
Min nTPM: 366.1
Sample A Female 366.1
Sample B Female 428.8
Sample C Male 715.3
Sample D Male 888.1

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 1260.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1260.2
Samples: 4

Max nTPM: 1305.0
Min nTPM: 1135.3
Sample A Male 1301.0
Sample B Male 1135.3
Sample C Female 1299.4
Sample D Female 1305.0

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 4.9
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.7
71836842 Antisense, RP_051017_02_C05, Mouse strain C57BL/6J (56 days, male) 8.4
68196931 Antisense, RP_041116_01_F10, Mouse strain C57BL/6J (56 days, male) 0.9
Pons
Expression energy: 4.9
71836842 Antisense, RP_051017_02_C05, Mouse strain C57BL/6J (56 days, male) 8.6
68196931 Antisense, RP_041116_01_F10, Mouse strain C57BL/6J (56 days, male) 1.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.