HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:2920.3 nTPM
HPA:2920.3 nTPM
GTEx:1709.6 nTPM
FANTOM5:767.7 Scaled Tags Per Million
Mouse:0.0 nTPM
Allen mouse:15.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 2920.3
Sample id Sample description nTPM
Hippocampus
nTPM: 2607.7
2529 Female, age 94, left hemisphere 2683.4
1898 Male, age 80, left hemisphere 2630.7
2621 Female, age 67, right hemisphere 2619.0
1855 Male, age 76, left hemisphere 2617.3
1911 Female, age 85, right hemisphere 2567.1
2148 Female, age 91, left hemisphere 2528.6
Dentate gyrus
nTPM: 2617.5
2246 Female, age 85, both hemispheres 2723.8
2531 Female, age 67, both hemispheres 2683.0
2530 Female, age 94, left hemisphere 2655.5
2010 Male, age 76, both hemispheres 2579.4
1927 Female, age 91, both hemispheres 2557.6
2528 Male, age 74, both hemispheres 2505.9
Entorhinal gyrus
nTPM: 2734.7
1938 Female, age 85, left hemisphere 2887.2
2764 Male, age 80, right hemisphere 2854.6
1787 Male, age 76, left hemisphere 2761.2
2613 Female, age 94, left hemisphere 2701.4
2686 Male, age 75, right hemisphere 2650.9
2117 Female, age 91, right hemisphere 2552.6
Hippocampus, CA1
nTPM: 2637.2
2045 Male, age 76, both hemispheres 2738.8
2749 Male, age 80, left hemisphere 2641.8
2082 Female, age 91, right hemisphere 2627.4
2527 Male, age 74, both hemispheres 2607.6
1873 Female, age 85, both hemispheres 2570.3
Hippocampus, CA2
nTPM: 2612.9
1940 Female, age 85, left hemisphere 2696.8
2437 Female, age 94, left hemisphere 2687.5
1892 Male, age 76, both hemispheres 2675.8
2113 Female, age 91, right hemisphere 2582.2
2249 Male, age 74, both hemispheres 2530.9
1963 Male, age 80, left hemisphere 2504.4
Hippocampus, CA3
nTPM: 2649.9
1867 Male, age 76, both hemispheres 2718.8
2137 Male, age 80, left hemisphere 2675.2
2861 Female, age 67, both hemispheres 2664.0
2620 Female, age 94, left hemisphere 2660.4
1891 Female, age 85, both hemispheres 2620.7
2436 Male, age 74, both hemispheres 2560.2
Parahippocampal cortex
nTPM: 2768.6
2532 Female, age 72, left hemisphere 2974.0
1933 Female, age 85, both hemispheres 2963.8
1850 Male, age 80, both hemispheres 2897.7
2245 Female, age 91, both hemispheres 2772.3
2018 Male, age 76, both hemispheres 2769.8
2250 Female, age 67, right hemisphere 2736.9
1990 Female, age 91, right hemisphere 2689.4
2622 Female, age 67, right hemisphere 2650.9
2693 Female, age 94, both hemispheres 2649.7
2692 Male, age 74, both hemispheres 2581.5
Perirhinal gyrus
nTPM: 2920.3
1847 Female, age 91, left hemisphere 2995.2
1841 Female, age 85, right hemisphere 2984.4
1794 Male, age 80, right hemisphere 2981.1
2521 Female, age 94, right hemisphere 2858.1
2848 Male, age 76, right hemisphere 2782.5
Subiculum
nTPM: 2645.5
1977 Female, age 85, both hemispheres 2828.0
2438 Female, age 94, left hemisphere 2678.2
2619 Male, age 74, both hemispheres 2625.6
1901 Male, age 80, both hemispheres 2612.7
2042 Male, age 76, both hemispheres 2606.2
2729 Female, age 91, right hemisphere 2522.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1709.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1709.6
Samples: 197

Max nTPM: 7182.2
Min nTPM: 558.6
Std nTPM: 841.6
Median nTPM: 1550.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 7182.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 4942.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 4058.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 3802.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 3734.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 3728.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 3682.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 3505.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 3482.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 3419.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 3324.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 767.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 767.7
FF:10169-103B7 60 years, female 901.9
FF:10153-102I9 76 years, female 633.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.6
73521810 Antisense, RP_051101_03_A09, Mouse strain C57BL/6J (56 days, male) 15.7
69816996 Antisense, RP_050510_02_D07, Mouse strain C57BL/6J (56 days, male) 15.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.