HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:975.4 nTPM
HPA:975.4 nTPM
GTEx:839.6 nTPM
FANTOM5:981.4 Scaled Tags Per Million
Mouse:394.9 nTPM
Allen mouse:17.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 975.4
Sample id Sample description nTPM
Hippocampus
nTPM: 916.9
1898 Male, age 80, left hemisphere 995.6
1855 Male, age 76, left hemisphere 941.7
2529 Female, age 94, left hemisphere 908.2
2621 Female, age 67, right hemisphere 903.4
1911 Female, age 85, right hemisphere 895.6
2148 Female, age 91, left hemisphere 857.0
Dentate gyrus
nTPM: 908.2
2010 Male, age 76, both hemispheres 976.6
1927 Female, age 91, both hemispheres 941.1
2246 Female, age 85, both hemispheres 913.4
2528 Male, age 74, both hemispheres 888.9
2530 Female, age 94, left hemisphere 881.8
2531 Female, age 67, both hemispheres 847.1
Entorhinal gyrus
nTPM: 908.8
1938 Female, age 85, left hemisphere 986.4
2764 Male, age 80, right hemisphere 958.9
1787 Male, age 76, left hemisphere 934.4
2117 Female, age 91, right hemisphere 873.7
2613 Female, age 94, left hemisphere 862.1
2686 Male, age 75, right hemisphere 837.4
Hippocampus, CA1
nTPM: 957.4
2749 Male, age 80, left hemisphere 1092.4
1873 Female, age 85, both hemispheres 958.2
2045 Male, age 76, both hemispheres 935.5
2527 Male, age 74, both hemispheres 925.4
2082 Female, age 91, right hemisphere 875.3
Hippocampus, CA2
nTPM: 924.7
1892 Male, age 76, both hemispheres 993.8
1963 Male, age 80, left hemisphere 974.3
2249 Male, age 74, both hemispheres 961.9
2437 Female, age 94, left hemisphere 883.1
1940 Female, age 85, left hemisphere 871.6
2113 Female, age 91, right hemisphere 863.8
Hippocampus, CA3
nTPM: 922.9
2137 Male, age 80, left hemisphere 1019.4
1867 Male, age 76, both hemispheres 955.7
2436 Male, age 74, both hemispheres 947.9
1891 Female, age 85, both hemispheres 912.5
2620 Female, age 94, left hemisphere 875.3
2861 Female, age 67, both hemispheres 826.8
Parahippocampal cortex
nTPM: 906.4
1850 Male, age 80, both hemispheres 1000.0
1933 Female, age 85, both hemispheres 947.1
2018 Male, age 76, both hemispheres 946.2
1990 Female, age 91, right hemisphere 924.8
2250 Female, age 67, right hemisphere 898.4
2245 Female, age 91, both hemispheres 897.2
2532 Female, age 72, left hemisphere 893.4
2692 Male, age 74, both hemispheres 864.5
2693 Female, age 94, both hemispheres 856.8
2622 Female, age 67, right hemisphere 835.6
Perirhinal gyrus
nTPM: 975.4
1847 Female, age 91, left hemisphere 1022.4
1794 Male, age 80, right hemisphere 1006.0
1841 Female, age 85, right hemisphere 1000.5
2848 Male, age 76, right hemisphere 956.5
2521 Female, age 94, right hemisphere 891.7
Subiculum
nTPM: 912.6
1901 Male, age 80, both hemispheres 949.0
1977 Female, age 85, both hemispheres 946.7
2042 Male, age 76, both hemispheres 925.6
2438 Female, age 94, left hemisphere 919.3
2619 Male, age 74, both hemispheres 871.5
2729 Female, age 91, right hemisphere 863.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 839.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 839.6
Samples: 197

Max nTPM: 2150.5
Min nTPM: 282.9
Std nTPM: 333.6
Median nTPM: 778.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2150.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 2048.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1899.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 1743.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 1737.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1699.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 1641.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1549.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 1527.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1516.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 1494.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 981.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 981.4
FF:10169-103B7 60 years, female 1329.9
FF:10153-102I9 76 years, female 633.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 394.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 300.2
Samples: 4

Max nTPM: 342.3
Min nTPM: 259.3
Sample A Male 259.3
Sample B Male 284.7
Sample C Female 342.3
Sample D Female 314.3
Hippocampal formation
nTPM: 394.8
Samples: 4

Max nTPM: 450.6
Min nTPM: 369.1
Sample A Male 450.6
Sample B Male 372.6
Sample C Female 387.0
Sample D Female 369.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.2
81600140 Antisense, RP_080312_03_A05, Mouse strain C57BL/6J (56 days, male) 17.7
69627021 Antisense, RP_050428_01_G02, Mouse strain C57BL/6J (56 days, male) 16.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.