PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:560.1 nTPM
HPA:560.1 nTPM
FANTOM5:338.7 Scaled Tags Per Million
Pig:630.5 nTPM
Mouse:994.9 nTPM
Allen mouse:6.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 560.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 528.5
2188 Female, age 91, both hemispheres 605.6
2301 Female, age 85, both hemispheres 585.0
2090 Male, age 80, both hemispheres 509.4
1984 Male, age 76, both hemispheres 413.9
Area postrema
nTPM: 422.1
2306 Male, age 80, both hemispheres 460.0
2054 Male, age 76, both hemispheres 431.5
2799 Male, age 61, both hemispheres 374.6
Cuneate nuclei
nTPM: 455.9
2381 Male, age 80, both hemispheres 497.2
2376 Male, age 61, both hemispheres 447.8
2131 Male, age 76, both hemispheres 422.7
Dorsal cochlear nucleus
nTPM: 460.8
2187 Female, age 91, both hemispheres 568.6
2802 Male, age 74, right hemisphere 463.1
2378 Male, age 80, both hemispheres 438.6
2058 Male, age 76, both hemispheres 426.9
2370 Male, age 61, both hemispheres 406.9
Dorsal medullary reticular nucleus
nTPM: 454.5
2040 Female, age 85, both hemispheres 494.3
2373 Male, age 61, both hemispheres 436.0
2088 Male, age 76, both hemispheres 433.3
Dorsal motor vagal complex
nTPM: 432.5
2844 Male, age 55, unknown 472.0
2133 Female, age 91, both hemispheres 461.8
2000 Male, age 74, unknown 449.3
2813 Female, age 72, unknown 448.2
2185 Male, age 76, both hemispheres 433.8
2807 Female, age 85, both hemispheres 426.4
2643 Male, age 74, both hemispheres 397.7
2797 Male, age 61, both hemispheres 371.0
Dorsal tegmental nucleus
nTPM: 459.5
2326 Male, age 74, both hemispheres 501.6
2083 Male, age 80, both hemispheres 487.1
1936 Male, age 76, left hemisphere 438.9
2358 Male, age 61, both hemispheres 410.5
Dorsolateral tegmental area
nTPM: 465.8
2751 Female, age 85, both hemispheres 544.2
2654 Male, age 80, both hemispheres 470.3
2337 Male, age 61, both hemispheres 441.3
2141 Male, age 76, both hemispheres 438.6
2360 Male, age 74, both hemispheres 434.6
Gigantocellular reticular nuclei, medullary
nTPM: 488.7
2387 Female, age 91, both hemispheres 551.1
2314 Male, age 61, both hemispheres 547.5
1876 Female, age 85, both hemispheres 510.9
2310 Male, age 80, both hemispheres 458.3
2462 Male, age 74, both hemispheres 444.0
2022 Male, age 76, right hemisphere 420.5
Gigantocellular reticular nuclei, pars
nTPM: 468.1
2336 Male, age 61, both hemispheres 481.5
2084 Female, age 85, both hemispheres 466.2
2330 Male, age 80, both hemispheres 465.7
2706 Male, age 80, both hemispheres 463.6
2168 Male, age 76, both hemispheres 463.4
Inferior olive
nTPM: 538.1
2563 Male, age 74, both hemispheres 603.7
2628 Female, age 91, both hemispheres 546.2
2178 Male, age 61, both hemispheres 529.7
2085 Female, age 85, both hemispheres 525.6
2379 Male, age 80, both hemispheres 485.2
Kolliker-Fuse nucleus
nTPM: 495.2
2793 Female, age 91, left hemisphere 622.1
2163 Male, age 80, both hemispheres 436.9
2315 Male, age 76, right hemisphere 426.4
Lateral lemniscal nuclei
nTPM: 501.3
2320 Female, age 91, left hemisphere 551.7
2746 Female, age 85, left hemisphere 504.8
2453 Male, age 74, right hemisphere 499.1
2036 Male, age 80, both hemispheres 475.5
2169 Male, age 76, both hemispheres 475.3
Lateral medullary reticular nucleus
nTPM: 550.0
2305 Male, age 74, both hemispheres 733.1
2374 Male, age 61, both hemispheres 537.5
2804 Female, age 91, both hemispheres 533.9
2852 Male, age 80, both hemispheres 516.7
2190 Female, age 85, both hemispheres 508.4
2044 Male, age 76, both hemispheres 470.5
Lateral parabrachial nucleus
nTPM: 473.7
2792 Male, age 76, both hemispheres 560.8
2013 Male, age 80, both hemispheres 465.0
2139 Female, age 85, right hemisphere 454.4
2790 Male, age 61, both hemispheres 414.6
Lateral vestibular nucleus
nTPM: 449.7
2311 Male, age 80, both hemispheres 471.4
2184 Male, age 76, both hemispheres 428.1
Locus coeruleus
nTPM: 479.1
2014 Male, age 55, unknown 524.3
2720 Male, age 74, both hemispheres 508.1
2788 Male, age 74, unknown 489.5
2123 Female, age 91, both hemispheres 481.7
2162 Male, age 80, both hemispheres 464.6
1980 Male, age 76, both hemispheres 454.1
2317 Female, age 72, unknown 431.7
Medial olivary nucleus
nTPM: 550.3
1962 Male, age 76, both hemispheres 580.6
2138 Female, age 91, both hemispheres 570.5
1943 Male, age 61, both hemispheres 557.1
2851 Male, age 80, both hemispheres 492.8
Medial parabrachial nucleus
nTPM: 496.1
2170 Female, age 91, both hemispheres 598.6
2854 Male, age 80, both hemispheres 523.0
2463 Female, age 85, right hemisphere 488.9
2786 Male, age 76, both hemispheres 462.7
2156 Male, age 61, both hemispheres 407.5
Medial periolivary nuclei
nTPM: 508.3
2791 Male, age 74, right hemisphere 593.2
2458 Female, age 91, both hemispheres 530.4
2081 Male, age 80, both hemispheres 495.8
2063 Male, age 76, both hemispheres 473.9
2171 Female, age 85, both hemispheres 448.1
Medial vestibular nucleus
nTPM: 495.9
2801 Male, age 74, both hemispheres 642.4
2803 Female, age 91, both hemispheres 532.4
2624 Male, age 61, both hemispheres 469.9
2093 Male, age 80, both hemispheres 461.1
2743 Female, age 85, both hemispheres 454.8
2134 Male, age 76, both hemispheres 414.6
Motor facial nucleus
nTPM: 501.0
2365 Male, age 74, right hemisphere 589.2
2697 Female, age 85, both hemispheres 529.9
2126 Male, age 61, both hemispheres 509.3
2062 Male, age 76, both hemispheres 463.0
2327 Male, age 80, both hemispheres 460.7
2795 Female, age 91, both hemispheres 454.0
Motor hypoglossal nucleus
nTPM: 483.7
2125 Female, age 91, both hemispheres 539.3
2182 Male, age 80, both hemispheres 509.0
2132 Female, age 85, both hemispheres 506.9
2461 Male, age 61, both hemispheres 453.0
2277 Male, age 76, both hemispheres 410.5
Motor trigeminal nucleus
nTPM: 484.9
2560 Male, age 74, both hemispheres 552.6
2321 Female, age 91, both hemispheres 529.8
2079 Male, age 80, both hemispheres 459.7
2309 Male, age 76, both hemispheres 450.0
2335 Male, age 61, both hemispheres 432.6
Nuclei of the trapezoid body
nTPM: 484.8
2159 Male, age 61, both hemispheres 513.4
2166 Male, age 80, both hemispheres 496.3
2368 Female, age 91, both hemispheres 493.3
1983 Male, age 76, both hemispheres 478.5
2735 Female, age 85, both hemispheres 442.3
Nucleus ambiguus
nTPM: 478.8
2071 Male, age 76, both hemispheres 533.9
2096 Female, age 85, both hemispheres 423.8
Nucleus cuneatus
nTPM: 466.7
2808 Female, age 85, both hemispheres 524.1
2380 Male, age 80, both hemispheres 509.5
2564 Male, age 74, both hemispheres 494.1
2100 Male, age 76, both hemispheres 443.6
2805 Female, age 91, both hemispheres 421.0
2562 Male, age 61, both hemispheres 407.7
Nucleus gracilis
nTPM: 502.7
2627 Male, age 74, both hemispheres 563.5
2382 Male, age 80, both hemispheres 516.3
2299 Female, age 85, both hemispheres 428.3
Nucleus raphe magnus
nTPM: 484.9
2455 Male, age 74, both hemispheres 516.5
2459 Female, age 91, both hemispheres 509.1
2051 Male, age 76, both hemispheres 494.5
2328 Male, age 80, both hemispheres 477.3
2160 Male, age 61, both hemispheres 470.5
2172 Female, age 85, both hemispheres 441.6
Nucleus raphe obscurus
nTPM: 560.1
2845 Female, age 85, midline 641.0
2142 Male, age 76, midline 520.8
2800 Male, age 61, midline 518.7
Nucleus raphe pallidus
nTPM: 535.8
2145 Male, age 76, midline 586.9
1924 Male, age 61, midline 513.1
2183 Male, age 80, midline 507.4
Nucleus tractus solitarii
nTPM: 417.5
2656 Male, age 76, both hemispheres 438.4
2144 Female, age 91, right hemisphere 432.5
2307 Male, age 80, both hemispheres 400.7
2191 Female, age 85, both hemispheres 398.6
Paramedian reticular nucleus
nTPM: 488.9
2050 Female, age 85, both hemispheres 520.0
2052 Male, age 76, both hemispheres 501.3
2313 Male, age 61, both hemispheres 468.4
2057 Male, age 80, both hemispheres 466.1
Parvicellular reticular nuclei
nTPM: 482.7
2095 Male, age 76, both hemispheres 490.8
2119 Male, age 80, both hemispheres 485.9
2558 Male, age 74, both hemispheres 471.5
Parvicellular reticular nuclei, medullary
nTPM: 462.6
2189 Female, age 91, both hemispheres 500.3
2181 Male, age 80, left hemisphere 448.3
2091 Female, age 85, both hemispheres 439.4
Peritrigeminal nucleus
nTPM: 473.7
2136 Male, age 76, both hemispheres 481.8
2179 Male, age 61, both hemispheres 475.5
2067 Female, age 85, both hemispheres 463.7
Pontine nuclei
nTPM: 524.9
2454 Male, age 74, left hemisphere 729.9
2319 Female, age 91, both hemispheres 587.0
2109 Female, age 72, unknown 516.7
1863 Male, age 55, unknown 501.3
1968 Male, age 76, left hemisphere 481.8
2727 Male, age 61, right hemisphere 475.9
2115 Male, age 80, left hemisphere 467.5
2787 Female, age 85, both hemispheres 438.9
Pontine raphe nucleus
nTPM: 473.2
2853 Male, age 76, midline 482.9
2122 Female, age 85, midline 463.6
Posteroventral cochlear nucleus
nTPM: 501.3
2135 Female, age 91, both hemispheres 642.7
2341 Male, age 80, both hemispheres 526.2
2070 Male, age 76, both hemispheres 469.4
2752 Female, age 85, both hemispheres 451.5
2371 Male, age 61, both hemispheres 416.8
Prepositus hypoglossal nucleus
nTPM: 475.1
2855 Female, age 85, right hemisphere 545.6
2086 Male, age 80, both hemispheres 404.7
Principal sensory trigeminal nucleus
nTPM: 489.2
2367 Female, age 91, left hemisphere 595.6
2158 Male, age 61, both hemispheres 468.9
2008 Male, age 80, left hemisphere 465.6
2324 Male, age 76, both hemispheres 426.7
Reticular pontine nucleus, caudal
nTPM: 528.1
2559 Male, age 74, both hemispheres 610.9
2457 Female, age 91, both hemispheres 556.1
2092 Male, age 76, both hemispheres 490.5
2332 Male, age 80, right hemisphere 454.8
Reticular pontine nucleus, oral
nTPM: 552.4
2361 Male, age 74, both hemispheres 686.2
2366 Female, age 91, both hemispheres 591.5
2012 Female, age 85, both hemispheres 499.6
1939 Male, age 80, both hemispheres 496.2
2167 Male, age 76, both hemispheres 488.3
Reticulotegmental nucleus
nTPM: 467.7
2322 Female, age 91, both hemispheres 505.1
2452 Male, age 74, both hemispheres 476.1
2333 Male, age 80, both hemispheres 448.5
2325 Male, age 76, both hemispheres 441.1
Spinal trigeminal nucleus, caudal
nTPM: 477.4
2312 Male, age 61, both hemispheres 524.6
2390 Female, age 91, both hemispheres 496.0
2642 Male, age 74, both hemispheres 463.9
2308 Male, age 80, both hemispheres 461.3
2447 Male, age 76, both hemispheres 441.3
Spinal trigeminal nucleus, interpolar
nTPM: 459.0
2389 Female, age 91, both hemispheres 499.1
2386 Female, age 85, both hemispheres 467.1
2033 Male, age 80, both hemispheres 462.4
2066 Male, age 76, right hemisphere 437.3
2625 Male, age 61, both hemispheres 428.9
Spinal trigeminal nucleus, oral
nTPM: 440.6
1978 Male, age 76, both hemispheres 454.3
2164 Male, age 80, both hemispheres 443.7
2737 Female, age 85, both hemispheres 423.8
Spinal vestibular nucleus
nTPM: 473.4
2806 Female, age 85, both hemispheres 519.1
2186 Female, age 91, both hemispheres 487.2
2384 Male, age 74, both hemispheres 483.6
2748 Male, age 76, both hemispheres 479.0
2780 Male, age 80, both hemispheres 442.6
2796 Male, age 61, both hemispheres 428.9
Subcoeruleus area
nTPM: 478.5
2369 Female, age 85, left hemisphere 564.5
1958 Male, age 80, both hemispheres 483.6
2089 Male, age 76, left hemisphere 464.4
2323 Female, age 91, left hemisphere 456.0
2451 Male, age 74, both hemispheres 423.8
Superior olive
nTPM: 523.1
2364 Male, age 74, right hemisphere 600.1
2020 Male, age 76, both hemispheres 521.1
2561 Female, age 91, both hemispheres 505.4
2329 Male, age 80, right hemisphere 499.4
1875 Female, age 85, both hemispheres 489.5
Superior vestibular nucleus
nTPM: 469.0
2383 Male, age 74, both hemispheres 507.6
2015 Male, age 80, both hemispheres 457.7
2061 Male, age 76, both hemispheres 441.8
Ventral medullary reticular nucleus
nTPM: 473.4
2372 Male, age 61, both hemispheres 484.9
2060 Male, age 76, both hemispheres 461.8
Ventral periolivary nuclei
nTPM: 486.2
2023 Male, age 76, both hemispheres 528.3
2165 Male, age 80, both hemispheres 480.0
2130 Female, age 85, both hemispheres 469.2
2794 Female, age 91, left hemisphere 467.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 488.3
2180 Male, age 61, both hemispheres 530.7
2302 Female, age 91, both hemispheres 506.4
2118 Male, age 80, both hemispheres 484.3
2741 Female, age 85, both hemispheres 460.6
1986 Male, age 76, both hemispheres 459.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 498.6
2449 Male, age 74, both hemispheres 545.1
2840 Female, age 85, both hemispheres 527.6
2456 Female, age 91, both hemispheres 497.5
1959 Male, age 76, both hemispheres 489.9
2161 Male, age 80, both hemispheres 471.8
2359 Male, age 61, both hemispheres 459.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 338.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 245.9
FF:10182-103D2 60 years, female 256.6
FF:10165-103B3 76 years, female 235.1
Medulla oblongata
Scaled Tags Per Million: 271.0
FF:10174-103C3 60 years, female 355.2
FF:10038-101F2 18-64 years, mixed 274.3
FF:10155-103A2 76 years, female 183.6
Pons
Scaled Tags Per Million: 338.7
FF:10033-101E6 18-54 years, mixed 338.7

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 630.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 630.5
Samples: 4

Max nTPM: 787.2
Min nTPM: 453.6
Sample A Female 622.2
Sample B Female 453.6
Sample C Male 659.0
Sample D Male 787.2
Pons
nTPM: 613.1
Samples: 4

Max nTPM: 698.3
Min nTPM: 479.5
Sample A Female 698.3
Sample B Female 479.5
Sample C Male 656.9
Sample D Male 617.5

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 994.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 994.9
Samples: 4

Max nTPM: 1054.7
Min nTPM: 919.8
Sample A Male 969.3
Sample B Male 919.8
Sample C Female 1035.7
Sample D Female 1054.7

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.3
71016595 Antisense, RP_050725_03_A05, Mouse strain C57BL/6J (56 days, male) 4.7
68632984 Antisense, RP_050125_02_B12, Mouse strain C57BL/6J (56 days, male) 3.8
Pons
Expression energy: 6.1
71016595 Antisense, RP_050725_03_A05, Mouse strain C57BL/6J (56 days, male) 6.6
68632984 Antisense, RP_050125_02_B12, Mouse strain C57BL/6J (56 days, male) 5.7

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