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SNRPD2
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:311.1 nTPM
HPA:311.1 nTPM
GTEx:169.9 nTPM
FANTOM5:72.9 Scaled Tags Per Million
Pig:162.0 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 311.1
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 308.4
2565 Male, age 75, midline 326.4
1981 Female, age 72, midline 319.0
2194 Female, age 79, both hemispheres 300.4
2816 Male, age 47, midline 299.6
2048 Male, age 55, midline 296.5
Cervical spinal cord, dorsal horn
nTPM: 311.1
2173 Female, age 72, unknown 320.0
2296 Male, age 66, both hemispheres 318.4
2069 Male, age 47, both hemispheres 317.1
1877 Male, age 55, unknown 310.0
2297 Male, age 75, both hemispheres 302.3
2721 Male, age 90, both hemispheres 299.0
Cervical spinal cord, ventral horn
nTPM: 307.6
2480 Male, age 75, both hemispheres 318.5
2098 Female, age 72, unknown 314.8
2809 Male, age 90, both hemispheres 314.0
2068 Male, age 55, unknown 306.4
2295 Male, age 66, both hemispheres 299.7
2820 Female, age 79, both hemispheres 292.1

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 169.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 169.9
Samples: 159

Max nTPM: 299.3
Min nTPM: 89.0
Std nTPM: 37.6
Median nTPM: 166.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 299.3
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 293.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 274.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 271.3
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 254.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 246.1
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 245.9
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 238.9
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 238.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 238.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 236.7
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 231.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 231.4
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 230.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 220.8
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 217.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 217.3
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 215.1
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 206.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 203.9
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 203.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 202.5
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 202.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 201.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 201.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 201.3
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 200.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 200.0
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 199.3
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 199.2
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 198.6
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 197.4
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 196.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 196.4
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 196.1
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 195.8
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 195.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 194.1
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 192.4
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 192.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 191.3
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 190.5
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 190.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 187.6
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 186.5
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 186.4
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 186.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 185.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 185.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 185.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 184.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 184.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 184.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 183.8
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 179.3
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 179.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 179.2
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 179.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 178.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 177.9
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 176.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 175.2
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 174.3
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 174.0
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 173.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 172.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 172.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 172.0
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 172.0
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 171.7
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 169.6
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 169.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 169.1
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 169.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 168.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 167.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 166.9
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 166.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 166.7
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 166.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 165.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 165.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 165.3
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 164.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 163.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 162.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 162.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 162.2
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 162.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 161.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 161.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 160.8
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 160.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 160.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 158.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 158.9
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 157.2
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 156.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 156.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 156.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 154.7
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 152.9
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 152.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 151.5
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 151.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 150.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 150.4
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 150.3
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 150.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 150.1
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 149.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 149.0
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 148.9
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 147.8
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 147.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 147.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 147.3
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 146.8
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 146.3
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 145.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 145.4
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 144.1
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 143.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 143.8
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 142.9
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 140.9
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 140.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 139.9
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 139.1
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 139.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 138.3
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 138.0
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 133.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 131.2
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 130.2
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 129.1
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 129.0
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 128.6
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 128.6
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 127.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 126.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 126.2
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 124.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 124.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 124.3
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 124.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 123.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 122.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 121.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 117.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 116.9
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 116.7
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 116.2
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 114.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 109.9
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 107.2
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 102.2
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 91.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 89.0
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 72.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 72.9
FF:10181-103D1 60 years, female 111.8
FF:10159-103A6 76 years, female 33.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 162.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 162.0
Samples: 4

Max nTPM: 221.1
Min nTPM: 133.1
Sample A Female 133.1
Sample B Female 159.9
Sample C Male 221.1
Sample D Male 134.0
Ventral spinal cord
nTPM: 148.4
Samples: 4

Max nTPM: 172.1
Min nTPM: 122.4
Sample A Female 122.4
Sample B Female 163.2
Sample C Male 172.1
Sample D Male 135.7

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