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RPS3A
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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1038.8 nTPM
HPA:1038.8 nTPM
FANTOM5:19.7 Scaled Tags Per Million
Pig:73.0 nTPM
Allen mouse:8.0 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 1038.8
Sample id Sample description nTPM
Area postrema
nTPM: 1023.8
2306 Male, age 80, both hemispheres 1061.3
2799 Male, age 61, both hemispheres 1044.9
2054 Male, age 76, both hemispheres 965.4
Cuneate nuclei
nTPM: 985.1
2376 Male, age 61, both hemispheres 1002.3
2381 Male, age 80, both hemispheres 993.5
2131 Male, age 76, both hemispheres 959.5
Dorsal medullary reticular nucleus
nTPM: 995.1
2373 Male, age 61, both hemispheres 1013.2
2040 Female, age 85, both hemispheres 994.6
2088 Male, age 76, both hemispheres 977.5
Dorsal motor vagal complex
nTPM: 1013.7
2797 Male, age 61, both hemispheres 1082.0
2643 Male, age 74, both hemispheres 1028.5
2807 Female, age 85, both hemispheres 1027.1
2133 Female, age 91, both hemispheres 1021.4
2844 Male, age 55, unknown 997.2
2000 Male, age 74, unknown 993.9
2813 Female, age 72, unknown 987.8
2185 Male, age 76, both hemispheres 971.4
Gigantocellular reticular nuclei, medullary
nTPM: 1009.5
2314 Male, age 61, both hemispheres 1042.6
1876 Female, age 85, both hemispheres 1011.6
2387 Female, age 91, both hemispheres 1011.5
2310 Male, age 80, both hemispheres 1001.0
2022 Male, age 76, right hemisphere 999.6
2462 Male, age 74, both hemispheres 990.7
Gigantocellular reticular nuclei, pars
nTPM: 990.5
2084 Female, age 85, both hemispheres 1013.9
2168 Male, age 76, both hemispheres 996.7
2336 Male, age 61, both hemispheres 985.2
2706 Male, age 80, both hemispheres 980.3
2330 Male, age 80, both hemispheres 976.5
Inferior olive
nTPM: 1031.8
2379 Male, age 80, both hemispheres 1044.4
2178 Male, age 61, both hemispheres 1036.8
2563 Male, age 74, both hemispheres 1034.8
2085 Female, age 85, both hemispheres 1032.6
2628 Female, age 91, both hemispheres 1010.5
Lateral medullary reticular nucleus
nTPM: 1023.8
2190 Female, age 85, both hemispheres 1041.6
2852 Male, age 80, both hemispheres 1039.8
2804 Female, age 91, both hemispheres 1035.7
2305 Male, age 74, both hemispheres 1035.0
2374 Male, age 61, both hemispheres 1006.6
2044 Male, age 76, both hemispheres 983.9
Medial vestibular nucleus
nTPM: 1004.7
2803 Female, age 91, both hemispheres 1027.8
2743 Female, age 85, both hemispheres 1018.2
2801 Male, age 74, both hemispheres 1006.4
2093 Male, age 80, both hemispheres 1004.6
2624 Male, age 61, both hemispheres 988.8
2134 Male, age 76, both hemispheres 982.1
Motor hypoglossal nucleus
nTPM: 996.3
2132 Female, age 85, both hemispheres 1029.7
2125 Female, age 91, both hemispheres 1022.4
2182 Male, age 80, both hemispheres 1003.3
2277 Male, age 76, both hemispheres 967.6
2461 Male, age 61, both hemispheres 958.4
Nucleus ambiguus
nTPM: 998.4
2071 Male, age 76, both hemispheres 1033.8
2096 Female, age 85, both hemispheres 963.1
Nucleus cuneatus
nTPM: 1005.7
2808 Female, age 85, both hemispheres 1033.5
2380 Male, age 80, both hemispheres 1031.4
2805 Female, age 91, both hemispheres 1011.6
2564 Male, age 74, both hemispheres 1009.5
2562 Male, age 61, both hemispheres 983.6
2100 Male, age 76, both hemispheres 964.6
Nucleus gracilis
nTPM: 1025.7
2299 Female, age 85, both hemispheres 1032.0
2382 Male, age 80, both hemispheres 1026.5
2627 Male, age 74, both hemispheres 1018.6
Nucleus raphe magnus
nTPM: 989.4
2459 Female, age 91, both hemispheres 999.6
2455 Male, age 74, both hemispheres 996.8
2160 Male, age 61, both hemispheres 990.8
2051 Male, age 76, both hemispheres 988.1
2328 Male, age 80, both hemispheres 983.5
2172 Female, age 85, both hemispheres 977.8
Nucleus raphe obscurus
nTPM: 1030.7
2845 Female, age 85, midline 1037.8
2142 Male, age 76, midline 1034.1
2800 Male, age 61, midline 1020.3
Nucleus raphe pallidus
nTPM: 1038.8
1924 Male, age 61, midline 1068.4
2145 Male, age 76, midline 1027.3
2183 Male, age 80, midline 1020.6
Nucleus tractus solitarii
nTPM: 1009.4
2144 Female, age 91, right hemisphere 1086.0
2191 Female, age 85, both hemispheres 1017.7
2656 Male, age 76, both hemispheres 970.9
2307 Male, age 80, both hemispheres 963.0
Parvicellular reticular nuclei
nTPM: 1000.8
2119 Male, age 80, both hemispheres 1018.5
2095 Male, age 76, both hemispheres 1018.1
2558 Male, age 74, both hemispheres 965.6
Parvicellular reticular nuclei, medullary
nTPM: 1004.8
2091 Female, age 85, both hemispheres 1008.7
2189 Female, age 91, both hemispheres 1006.6
2181 Male, age 80, left hemisphere 999.1
Peritrigeminal nucleus
nTPM: 1027.8
2067 Female, age 85, both hemispheres 1057.1
2136 Male, age 76, both hemispheres 1023.2
2179 Male, age 61, both hemispheres 1003.2
Prepositus hypoglossal nucleus
nTPM: 1024.8
2086 Male, age 80, both hemispheres 1027.1
2855 Female, age 85, right hemisphere 1022.5
Spinal trigeminal nucleus, caudal
nTPM: 993.5
2312 Male, age 61, both hemispheres 1001.1
2308 Male, age 80, both hemispheres 999.0
2642 Male, age 74, both hemispheres 996.4
2390 Female, age 91, both hemispheres 993.0
2447 Male, age 76, both hemispheres 977.9
Spinal trigeminal nucleus, interpolar
nTPM: 1000.7
2066 Male, age 76, right hemisphere 1013.0
2386 Female, age 85, both hemispheres 1006.6
2033 Male, age 80, both hemispheres 1004.9
2389 Female, age 91, both hemispheres 1004.8
2625 Male, age 61, both hemispheres 974.1
Spinal vestibular nucleus
nTPM: 1024.3
2384 Male, age 74, both hemispheres 1062.3
2806 Female, age 85, both hemispheres 1032.7
2780 Male, age 80, both hemispheres 1021.6
2796 Male, age 61, both hemispheres 1012.9
2186 Female, age 91, both hemispheres 1012.5
2748 Male, age 76, both hemispheres 1004.0
Ventral medullary reticular nucleus
nTPM: 1015.4
2372 Male, age 61, both hemispheres 1040.1
2060 Male, age 76, both hemispheres 990.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1032.4
2118 Male, age 80, both hemispheres 1064.8
2302 Female, age 91, both hemispheres 1046.3
2741 Female, age 85, both hemispheres 1026.5
2180 Male, age 61, both hemispheres 1016.7
1986 Male, age 76, both hemispheres 1007.6

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 19.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 19.7
FF:10038-101F2 18-64 years, mixed 22.8
FF:10155-103A2 76 years, female 18.2
FF:10174-103C3 60 years, female 18.0

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 73.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 73.0
Samples: 4

Max nTPM: 87.3
Min nTPM: 63.1
Sample A Female 63.4
Sample B Female 63.1
Sample C Male 78.2
Sample D Male 87.3

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 8.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 8.0
68191186 Antisense, RP_041122_02_H09, Mouse strain C57BL/6J (56 days, male) 8.0

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