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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:810.9 nTPM
HPA:810.9 nTPM
GTEx:1322.8 nTPM
FANTOM5:2427.7 Scaled Tags Per Million
Pig:790.9 nTPM
Mouse:1468.7 nTPM
Allen mouse:17.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB026225
Glial cells High
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 810.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 810.9
2481 Female, age 94, left hemisphere 1081.2
2288 Male, age 75, left hemisphere 888.0
2290 Female, age 72, unknown 857.7
1854 Male, age 80, left hemisphere 792.5
1857 Female, age 85, left hemisphere 787.9
2846 Female, age 79, unknown 714.2
1781 Male, age 74, unknown 694.1
2289 Male, age 61, right hemisphere 671.7
Claustrum
nTPM: 648.3
1956 Male, age 74, unknown 726.5
2198 Male, age 80, both hemispheres 712.0
2196 Female, age 79, unknown 692.6
2568 Male, age 61, both hemispheres 672.9
2645 Female, age 72, unknown 652.1
2392 Female, age 94, both hemispheres 623.3
2491 Male, age 75, both hemispheres 614.1
2284 Female, age 91, both hemispheres 604.8
2292 Female, age 85, both hemispheres 536.9
Globus pallidus, externus
nTPM: 621.8
1996 Male, age 80, right hemisphere 709.5
2646 Male, age 61, right hemisphere 687.4
2772 Female, age 79, unknown 597.6
2395 Male, age 75, both hemispheres 592.0
2567 Female, age 72, unknown 522.4
Globus pallidus, internus
nTPM: 620.7
2483 Female, age 94, right hemisphere 806.4
2037 Male, age 80, right hemisphere 677.5
1818 Male, age 74, unknown 672.0
2287 Male, age 75, right hemisphere 624.4
2778 Female, age 91, both hemispheres 561.6
2566 Female, age 72, unknown 513.0
2111 Female, age 85, right hemisphere 489.9
Nucleus accumbens
nTPM: 734.0
2286 Male, age 75, left hemisphere 927.8
2391 Female, age 94, left hemisphere 806.0
1856 Female, age 91, right hemisphere 745.3
2698 Female, age 72, unknown 738.3
1806 Female, age 85, left hemisphere 720.7
1783 Male, age 74, unknown 693.6
2824 Male, age 61, right hemisphere 640.9
2732 Male, age 80, right hemisphere 599.3
Nucleus basalis of Meynert
nTPM: 693.6
2569 Male, age 61, both hemispheres 731.2
2393 Male, age 80, right hemisphere 712.0
2484 Female, age 94, left hemisphere 688.6
2821 Male, age 75, both hemispheres 642.5
Nucleus of the diagonal band
nTPM: 618.7
2029 Male, age 61, right hemisphere 675.9
1812 Female, age 91, both hemispheres 658.1
2775 Male, age 80, right hemisphere 645.0
2195 Female, age 85, both hemispheres 634.0
1979 Male, age 74, unknown 480.6
Olfactory tubercle
nTPM: 742.1
1846 Male, age 80, right hemisphere 882.1
2856 Male, age 75, right hemisphere 807.8
1998 Female, age 91, both hemispheres 686.4
2487 Female, age 94, left hemisphere 592.2
Putamen
nTPM: 721.3
2482 Female, age 94, left hemisphere 965.6
1838 Male, age 80, right hemisphere 773.7
1937 Female, age 91, right hemisphere 686.7
2489 Female, age 72, unknown 683.2
1829 Male, age 74, unknown 667.0
2647 Male, age 75, left hemisphere 638.4
2466 Female, age 79, unknown 634.5
Septal nuclei
nTPM: 612.1
2031 Female, age 72, unknown 733.7
2629 Female, age 94, right hemisphere 668.7
1960 Male, age 74, unknown 652.9
2009 Female, age 91, both hemispheres 581.9
2059 Female, age 85, both hemispheres 572.6
2199 Male, age 80, right hemisphere 565.7
2394 Male, age 61, left hemisphere 509.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 1322.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1322.8
Samples: 246

Max nTPM: 3122.5
Min nTPM: 175.0
Std nTPM: 532.4
Median nTPM: 1255.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 3122.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 3013.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 2965.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 2838.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 2495.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 2480.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 2466.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 2458.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 2420.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 2399.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 2368.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 2297.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 2293.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 2241.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 2229.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 2217.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 2202.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2179.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 2148.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 2126.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 2112.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 2056.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 2036.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 2033.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1989.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1988.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1985.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1983.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1982.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1978.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1950.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1929.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1909.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1902.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1884.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1879.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1864.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1846.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1839.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1838.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1834.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1833.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1829.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1819.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1819.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1813.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1808.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1795.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1769.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1744.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1737.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1737.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1721.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1714.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1713.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1707.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 1706.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1684.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 1668.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 1660.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1653.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1648.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 1647.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1633.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1610.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1609.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 1587.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1581.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1575.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1573.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1572.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1567.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1563.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 1562.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1546.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 1544.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 1536.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1526.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1525.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1523.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1516.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1508.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1506.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1498.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1497.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1494.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1491.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1470.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1466.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 1462.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 1452.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1447.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1446.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 1439.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1434.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1430.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1425.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1424.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1419.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1396.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1385.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1383.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 1382.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1381.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 1379.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 1375.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1373.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1372.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 1370.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1369.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 1360.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1352.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1348.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1345.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1330.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 1323.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 1296.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1286.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 1279.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1276.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1273.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1261.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 1260.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1249.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1239.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 1234.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1232.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1229.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1220.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1208.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 1207.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1205.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1199.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1198.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1191.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 1187.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 1164.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1147.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 1146.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1146.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 1144.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1141.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1137.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1128.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1122.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1108.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1107.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 1100.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1096.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 1094.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1084.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1081.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1079.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 1077.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1075.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1075.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 1072.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1066.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1050.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1043.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 1041.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1041.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1040.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1028.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 1028.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1025.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1015.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1012.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1009.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1008.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1001.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1000.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 998.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 997.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 994.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 976.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 976.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 969.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 965.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 964.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 961.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 959.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 954.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 950.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 942.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 941.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 930.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 929.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 928.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 928.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 928.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 927.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 926.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 925.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 910.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 897.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 892.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 884.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 883.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 879.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 876.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 859.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 850.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 841.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 841.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 829.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 818.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 815.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 806.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 795.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 785.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 782.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 772.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 767.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 759.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 759.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 748.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 745.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 741.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 728.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 721.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 711.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 711.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 710.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 702.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 696.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 693.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 683.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 676.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 643.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 639.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 637.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 629.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 606.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 606.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 556.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 540.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 491.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 430.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 424.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 294.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 262.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 260.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 223.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 213.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 175.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 1118.2
Samples: 246

Max nTPM: 3252.3
Min nTPM: 205.8
Std nTPM: 538.9
Median nTPM: 1073.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 3252.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 3014.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 2892.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 2827.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 2766.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 2390.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 2333.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 2236.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 2211.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 2144.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 2116.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 2104.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 2101.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 2100.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 2086.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 2082.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 2025.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1995.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 1963.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1947.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 1934.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 1929.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 1906.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1883.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1879.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1876.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1863.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1838.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1833.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 1823.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1809.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 1742.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1722.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1698.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 1672.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 1657.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 1640.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1635.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1634.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1621.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 1590.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1588.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1584.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 1579.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1544.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 1515.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1503.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 1494.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 1478.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 1474.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 1446.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 1443.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 1440.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1426.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 1409.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 1401.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 1400.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 1395.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 1394.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1383.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 1382.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 1381.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 1369.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 1369.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 1367.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 1364.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 1362.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1353.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1345.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 1344.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 1340.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1323.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 1321.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1315.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 1311.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1299.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 1281.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 1252.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 1251.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 1246.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 1239.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1234.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 1221.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 1206.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 1204.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 1204.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 1201.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 1199.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1198.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 1198.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 1197.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1190.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 1186.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 1186.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 1183.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 1181.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 1179.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1175.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 1164.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 1161.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 1158.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1157.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 1157.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 1152.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 1146.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1146.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 1130.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 1127.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1120.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 1118.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1114.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 1112.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 1112.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 1110.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 1101.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1101.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 1086.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 1080.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 1077.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 1076.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1074.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 1074.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1074.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 1073.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 1054.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 1046.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 1046.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1037.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 1036.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 1020.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 1009.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 998.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 995.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 982.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 979.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 976.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 975.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 974.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 961.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 961.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 947.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 945.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 942.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 940.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 939.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 937.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 936.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 935.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 921.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 921.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 916.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 910.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 907.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 899.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 894.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 893.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 887.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 885.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 883.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 863.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 858.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 855.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 850.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 844.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 835.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 822.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 813.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 810.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 810.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 809.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 806.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 803.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 799.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 798.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 796.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 793.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 789.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 787.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 768.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 754.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 745.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 741.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 739.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 735.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 732.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 727.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 726.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 712.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 711.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 692.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 677.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 674.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 669.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 668.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 666.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 662.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 652.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 644.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 639.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 635.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 631.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 630.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 626.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 625.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 624.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 607.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 606.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 603.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 601.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 590.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 585.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 572.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 556.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 556.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 550.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 548.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 538.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 535.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 524.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 511.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 508.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 492.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 483.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 482.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 481.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 479.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 465.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 461.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 453.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 448.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 440.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 435.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 426.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 409.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 408.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 407.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 393.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 391.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 382.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 298.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 273.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 249.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 242.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 214.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 211.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 205.8
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Brain - Putamen (basal ganglia)
Average nTPM: 1227.6
Samples: 205

Max nTPM: 3040.0
Min nTPM: 253.3
Std nTPM: 530.2
Median nTPM: 1237.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 3040.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 2839.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 2738.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 2564.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 2482.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 2394.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 2381.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 2338.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 2195.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 2171.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 2159.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 2129.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 2105.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 2047.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 2046.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1992.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1958.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1944.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1912.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1905.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1887.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1838.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1822.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1821.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 1803.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1789.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1788.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1758.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1742.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1740.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1731.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1719.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1697.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1696.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1687.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1685.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1679.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 1673.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1660.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1656.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1643.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1616.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 1600.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 1599.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1595.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 1594.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 1591.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1588.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1586.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1578.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1553.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 1541.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1533.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1522.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 1521.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1520.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 1512.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1508.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 1507.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1506.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1490.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1484.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1464.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1458.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1458.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 1452.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 1451.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1444.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1443.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 1432.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1422.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1418.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 1413.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1401.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1399.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 1395.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1389.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1378.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 1376.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 1364.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 1362.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 1349.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 1349.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1346.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1331.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 1325.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1321.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1317.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 1315.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1308.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1298.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 1284.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 1284.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 1281.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 1280.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1278.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1276.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1263.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1259.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1252.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 1250.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1247.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1237.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1232.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1206.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1201.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1173.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1162.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1150.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1149.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 1146.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1145.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 1131.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1125.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 1117.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 1112.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1109.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 1108.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1106.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1093.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1091.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 1088.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 1084.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1067.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1066.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1063.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1053.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 1041.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1040.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 1022.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 1010.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 997.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 995.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 994.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 980.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 978.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 970.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 960.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 949.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 942.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 929.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 926.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 908.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 896.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 893.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 886.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 875.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 874.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 852.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 837.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 835.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 829.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 821.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 816.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 809.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 807.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 805.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 777.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 763.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 752.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 744.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 738.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 737.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 731.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 720.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 704.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 703.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 700.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 688.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 680.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 678.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 674.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 669.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 668.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 661.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 656.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 651.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 649.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 641.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 620.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 619.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 616.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 607.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 607.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 600.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 597.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 597.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 595.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 590.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 579.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 573.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 559.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 424.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 403.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 379.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 376.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 341.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 308.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 305.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 304.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 302.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 295.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 270.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 253.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 253.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 2427.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 2348.5
FF:10164-103B2 76 years, female 2348.5
Globus pallidus
Scaled Tags Per Million: 1188.6
FF:10175-103C4 60 years, female 1435.8
FF:10161-103A8 76 years, female 941.3
Nucleus accumbens
Scaled Tags Per Million: 1256.6
FF:10037-101F1 23-56 years, mixed 1256.6
Putamen
Scaled Tags Per Million: 2427.7
FF:10176-103C5 60 years, female 2427.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 790.9
Pig sample Sample description nTPM
Caudate
nTPM: 749.5
Samples: 4

Max nTPM: 881.6
Min nTPM: 628.0
Sample A Female 881.6
Sample B Female 735.8
Sample C Male 752.7
Sample D Male 628.0
Putamen
nTPM: 704.3
Samples: 4

Max nTPM: 855.8
Min nTPM: 583.9
Sample A Female 855.8
Sample B Female 583.9
Sample C Male 733.7
Sample D Male 643.9
Septum
nTPM: 790.9
Samples: 4

Max nTPM: 903.4
Min nTPM: 707.6
Sample A Female 786.8
Sample B Female 707.6
Sample C Male 903.4
Sample D Male 765.8
Ventral pallidum
nTPM: 707.0
Samples: 4

Max nTPM: 795.6
Min nTPM: 630.7
Sample A Female 712.1
Sample B Female 689.6
Sample C Male 795.6
Sample D Male 630.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 1468.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1215.1
Samples: 4

Max nTPM: 1270.4
Min nTPM: 1174.9
Sample A Male 1174.9
Sample B Male 1200.9
Sample C Female 1214.1
Sample D Female 1270.4
Septum
nTPM: 1468.7
Samples: 4

Max nTPM: 1564.8
Min nTPM: 1342.7
Sample A Male 1530.7
Sample B Male 1436.5
Sample C Female 1342.7
Sample D Female 1564.8
Ventral forebrain
nTPM: 1380.6
Samples: 4

Max nTPM: 1544.1
Min nTPM: 1318.3
Sample A Male 1322.6
Sample B Male 1544.1
Sample C Female 1318.3
Sample D Female 1337.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 17.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 14.5
74750016 Antisense, RP_060220_05_E06, Mouse strain C57BL/6J (56 days, male) 14.6
70429447 Antisense, RP_050614_01_F10, Mouse strain C57BL/6J (56 days, male) 14.4
Pallidum
Expression energy: 17.9
74750016 Antisense, RP_060220_05_E06, Mouse strain C57BL/6J (56 days, male) 18.8
70429447 Antisense, RP_050614_01_F10, Mouse strain C57BL/6J (56 days, male) 17.0

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