HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:542.3 nTPM
HPA:542.3 nTPM
GTEx:558.6 nTPM
FANTOM5:542.6 Scaled Tags Per Million
Pig:136.9 nTPM
Mouse:426.4 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042582
Glial cells Not detected
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 542.3
Sample id Sample description nTPM
Hippocampus
nTPM: 536.9
1898 Male, age 80, left hemisphere 550.6
2621 Female, age 67, right hemisphere 549.2
2529 Female, age 94, left hemisphere 534.5
2148 Female, age 91, left hemisphere 531.5
1855 Male, age 76, left hemisphere 528.5
1911 Female, age 85, right hemisphere 527.3
Dentate gyrus
nTPM: 532.4
2530 Female, age 94, left hemisphere 543.6
2531 Female, age 67, both hemispheres 538.3
1927 Female, age 91, both hemispheres 537.8
2246 Female, age 85, both hemispheres 534.3
2010 Male, age 76, both hemispheres 529.5
2528 Male, age 74, both hemispheres 511.2
Entorhinal gyrus
nTPM: 531.0
1938 Female, age 85, left hemisphere 542.3
2764 Male, age 80, right hemisphere 541.3
2686 Male, age 75, right hemisphere 530.1
1787 Male, age 76, left hemisphere 528.8
2613 Female, age 94, left hemisphere 526.7
2117 Female, age 91, right hemisphere 516.6
Hippocampus, CA1
nTPM: 536.8
2749 Male, age 80, left hemisphere 570.7
2527 Male, age 74, both hemispheres 544.4
1873 Female, age 85, both hemispheres 533.1
2082 Female, age 91, right hemisphere 519.2
2045 Male, age 76, both hemispheres 516.4
Hippocampus, CA2
nTPM: 534.0
1963 Male, age 80, left hemisphere 552.3
1892 Male, age 76, both hemispheres 549.7
2437 Female, age 94, left hemisphere 533.2
1940 Female, age 85, left hemisphere 526.8
2249 Male, age 74, both hemispheres 521.0
2113 Female, age 91, right hemisphere 520.7
Hippocampus, CA3
nTPM: 535.5
2137 Male, age 80, left hemisphere 553.7
2861 Female, age 67, both hemispheres 542.8
2436 Male, age 74, both hemispheres 535.9
1867 Male, age 76, both hemispheres 531.3
1891 Female, age 85, both hemispheres 530.7
2620 Female, age 94, left hemisphere 518.6
Parahippocampal cortex
nTPM: 538.7
2622 Female, age 67, right hemisphere 551.6
2245 Female, age 91, both hemispheres 549.1
2532 Female, age 72, left hemisphere 548.4
1850 Male, age 80, both hemispheres 545.1
1933 Female, age 85, both hemispheres 544.8
2250 Female, age 67, right hemisphere 540.5
1990 Female, age 91, right hemisphere 531.6
2692 Male, age 74, both hemispheres 529.6
2018 Male, age 76, both hemispheres 523.9
2693 Female, age 94, both hemispheres 522.1
Perirhinal gyrus
nTPM: 542.3
1847 Female, age 91, left hemisphere 547.6
1794 Male, age 80, right hemisphere 546.5
1841 Female, age 85, right hemisphere 545.8
2521 Female, age 94, right hemisphere 539.8
2848 Male, age 76, right hemisphere 531.6
Subiculum
nTPM: 528.2
1901 Male, age 80, both hemispheres 545.5
1977 Female, age 85, both hemispheres 535.7
2438 Female, age 94, left hemisphere 534.4
2619 Male, age 74, both hemispheres 530.8
2042 Male, age 76, both hemispheres 514.0
2729 Female, age 91, right hemisphere 508.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 558.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 558.6
Samples: 197

Max nTPM: 2010.2
Min nTPM: 229.6
Std nTPM: 208.3
Median nTPM: 525.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2010.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1284.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1220.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1089.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1051.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1046.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 984.5
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 938.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 927.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 925.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 899.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 542.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 542.6
FF:10169-103B7 60 years, female 801.5
FF:10153-102I9 76 years, female 283.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 136.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 136.9
Samples: 4

Max nTPM: 180.4
Min nTPM: 104.2
Sample A Female 180.4
Sample B Female 136.2
Sample C Male 126.9
Sample D Male 104.2
Entorhinal cortex
nTPM: 122.1
Samples: 4

Max nTPM: 160.5
Min nTPM: 89.3
Sample A Female 116.0
Sample B Female 160.5
Sample C Male 122.7
Sample D Male 89.3
Subiculum
nTPM: 112.2
Samples: 4

Max nTPM: 155.3
Min nTPM: 90.8
Sample A Female 155.3
Sample B Female 108.4
Sample C Male 94.3
Sample D Male 90.8
Ventral hippocampus
nTPM: 124.3
Samples: 4

Max nTPM: 149.2
Min nTPM: 103.6
Sample A Female 149.2
Sample B Female 103.6
Sample C Male 128.1
Sample D Male 116.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 426.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 423.2
Samples: 4

Max nTPM: 454.8
Min nTPM: 402.4
Sample A Male 403.0
Sample B Male 454.8
Sample C Female 432.5
Sample D Female 402.4
Hippocampal formation
nTPM: 426.3
Samples: 4

Max nTPM: 475.9
Min nTPM: 389.5
Sample A Male 475.9
Sample B Male 389.5
Sample C Female 421.8
Sample D Female 418.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
68076547 Antisense, RP_040923_02_F08, Mouse strain C57BL/6J (56 days, male) 3.2
70918976 Antisense, RP_050712_04_H06, Mouse strain C57BL/6J (56 days, male) 1.2

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The Human Protein Atlas

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