We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
NDUFS5
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • NDUFS5
BRAIN RETINA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:206.7 nTPM
GTEx:206.7 nTPM
FANTOM5:277.7 Scaled Tags Per Million
Pig:59.7 nTPM
Mouse:435.8 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 206.7
GTEx sample id Sample description nTPM
Retina
Average nTPM: 206.7
Samples: 105

Max nTPM: 269.1
Min nTPM: 123.6
Std nTPM: 27.0
Median nTPM:
376_1 75 years, female 269.1
375_1 74 years, female 263.3
35_1 74 years, female 258.2
17_1 71 years, male 255.7
2_1 77 years, female 254.4
153_1 70 years, female 245.8
384_1 83 years, male 245.5
377_1 82 years, female 244.6
321_1 62 years, female 244.3
404_1 82 years, female 243.3
379_1 60 years, male 241.7
322_1 76 years, male 241.5
177_1 74 years, male 239.7
246_1 77 years, male 239.6
189_1 76 years, male 239.1
396_1 62 years, male 238.3
265_1 87 years, male 236.7
120_1 70 years, female 236.5
142_1 61 years, female 235.3
173_1 67 years, male 234.8
229_1 69 years, female 234.6
319_1 81 years, male 234.1
162_1 79 years, female 232.9
6_1 73 years, female 231.6
452_1 88 years, female 230.0
526_1 61 years, male 228.2
126_1 63 years, male 227.6
414_1 84 years, female 226.2
4_1 88 years, female 222.7
406_1 79 years, male 221.5
425_1 59 years, female 219.7
389_1 86 years, female 219.0
394_1 75 years, female 218.3
243_1 75 years, male 217.7
145_1 84 years, male 215.8
386_1 76 years, male 214.5
317_1 60 years, male 214.4
335_1 73 years, female 214.0
315_1 62 years, female 213.4
405_1 91 years, male 212.9
355_1 70 years, female 212.8
349_1 83 years, male 211.0
237_1 82 years, male 210.8
99_1 64 years, male 210.5
115_1 83 years, male 210.5
81_1 67 years, male 210.1
495_1 57 years, female 209.2
254_1 77 years, female 206.7
286_1 68 years, female 206.6
347_1 72 years, male 205.9
119_1 70 years, female 205.8
137_1 83 years, male 204.9
295_1 61 years, female 204.2
163_1 78 years, male 203.4
415_1 77 years, female 203.1
217_1 76 years, male 203.0
413_1 59 years, female 202.5
447_1 81 years, male 202.4
313_1 79 years, female 202.3
320_1 89 years, female 202.1
41_1 94 years, female 201.4
503_1 68 years, male 200.5
308_1 70 years, female 200.4
354_1 81 years, female 199.9
9_1 66 years, female 199.8
501_1 88 years, male 199.2
324_1 76 years, male 198.7
499_1 55 years, female 198.1
43_1 64 years, female 196.8
172_1 72 years, female 195.9
468_1 89 years, male 195.5
266_1 85 years, male 194.7
466_1 57 years, female 194.3
109_1 81 years, female 193.1
293_1 68 years, female 192.7
18_1 88 years, male 191.8
350_1 84 years, female 188.9
316_1 62 years, male 188.1
139_1 64 years, female 187.6
311_1 78 years, male 186.0
352_1 62 years, male 185.9
291_1 76 years, male 185.7
42_1 85 years, male 185.6
292_1 71 years, male 185.6
251_1 78 years, male 185.5
506_1 65 years, male 184.1
353_1 82 years, female 183.7
356_1 87 years, female 183.6
318_1 68 years, male 182.7
264_1 73 years, female 182.4
518_1 75 years, female 182.3
351_1 91 years, male 178.1
307_1 66 years, female 177.1
288_1 66 years, female 176.0
348_1 84 years, male 175.0
117_1 61 years, male 174.3
480_1 63 years, male 173.8
89_1 63 years, male 172.7
314_1 67 years, male 170.6
517_1 88 years, male 169.3
32_1 67 years, male 164.1
218_1 71 years, female 155.6
149_1 88 years, male 149.3
491_1 89 years, female 131.1
490_1 67 years, female 123.6
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 277.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 277.7
FF:10030-101E3 24-65 years, mixed 277.7

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 59.7
Pig sample Sample description nTPM
Retina
nTPM: 59.7
Samples: 4

Max nTPM: 65.5
Min nTPM: 57.4
Sample A Female 58.2
Sample B Female 65.5
Sample C Male 57.4
Sample D Male 57.5

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 435.8
Mouse sample Sample description nTPM
Retina
nTPM: 435.8
Samples: 4

Max nTPM: 522.1
Min nTPM: 379.7
Sample A Male 447.7
Sample B Male 393.6
Sample C Female 522.1
Sample D Female 379.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.