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RPS21
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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1351.9 nTPM
HPA:1351.9 nTPM
FANTOM5:175.6 Scaled Tags Per Million
Pig:196.4 nTPM
Allen mouse:2.7 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 1351.9
Sample id Sample description nTPM
Area postrema
nTPM: 1306.1
2306 Male, age 80, both hemispheres 1334.4
2799 Male, age 61, both hemispheres 1323.0
2054 Male, age 76, both hemispheres 1260.8
Cuneate nuclei
nTPM: 1302.7
2376 Male, age 61, both hemispheres 1334.1
2381 Male, age 80, both hemispheres 1296.4
2131 Male, age 76, both hemispheres 1277.7
Dorsal medullary reticular nucleus
nTPM: 1320.6
2373 Male, age 61, both hemispheres 1336.0
2040 Female, age 85, both hemispheres 1329.3
2088 Male, age 76, both hemispheres 1296.6
Dorsal motor vagal complex
nTPM: 1313.7
2797 Male, age 61, both hemispheres 1366.2
2133 Female, age 91, both hemispheres 1328.1
2643 Male, age 74, both hemispheres 1326.2
2844 Male, age 55, unknown 1326.1
2000 Male, age 74, unknown 1306.5
2807 Female, age 85, both hemispheres 1303.3
2813 Female, age 72, unknown 1279.5
2185 Male, age 76, both hemispheres 1274.0
Gigantocellular reticular nuclei, medullary
nTPM: 1332.5
2314 Male, age 61, both hemispheres 1369.9
1876 Female, age 85, both hemispheres 1350.6
2387 Female, age 91, both hemispheres 1322.7
2310 Male, age 80, both hemispheres 1322.2
2462 Male, age 74, both hemispheres 1316.5
2022 Male, age 76, right hemisphere 1313.2
Gigantocellular reticular nuclei, pars
nTPM: 1313.0
2084 Female, age 85, both hemispheres 1363.1
2336 Male, age 61, both hemispheres 1314.2
2168 Male, age 76, both hemispheres 1308.5
2330 Male, age 80, both hemispheres 1292.3
2706 Male, age 80, both hemispheres 1286.9
Inferior olive
nTPM: 1329.7
2178 Male, age 61, both hemispheres 1364.6
2085 Female, age 85, both hemispheres 1343.7
2563 Male, age 74, both hemispheres 1339.1
2379 Male, age 80, both hemispheres 1312.2
2628 Female, age 91, both hemispheres 1289.2
Lateral medullary reticular nucleus
nTPM: 1326.7
2190 Female, age 85, both hemispheres 1352.5
2852 Male, age 80, both hemispheres 1343.0
2804 Female, age 91, both hemispheres 1329.7
2305 Male, age 74, both hemispheres 1326.2
2374 Male, age 61, both hemispheres 1309.7
2044 Male, age 76, both hemispheres 1299.2
Medial vestibular nucleus
nTPM: 1312.5
2743 Female, age 85, both hemispheres 1334.8
2803 Female, age 91, both hemispheres 1334.2
2093 Male, age 80, both hemispheres 1330.2
2801 Male, age 74, both hemispheres 1297.3
2134 Male, age 76, both hemispheres 1293.1
2624 Male, age 61, both hemispheres 1285.6
Motor hypoglossal nucleus
nTPM: 1304.1
2132 Female, age 85, both hemispheres 1351.1
2125 Female, age 91, both hemispheres 1346.6
2182 Male, age 80, both hemispheres 1295.7
2277 Male, age 76, both hemispheres 1280.8
2461 Male, age 61, both hemispheres 1246.4
Nucleus ambiguus
nTPM: 1312.3
2071 Male, age 76, both hemispheres 1340.8
2096 Female, age 85, both hemispheres 1283.9
Nucleus cuneatus
nTPM: 1303.1
2808 Female, age 85, both hemispheres 1322.6
2562 Male, age 61, both hemispheres 1311.3
2564 Male, age 74, both hemispheres 1310.8
2380 Male, age 80, both hemispheres 1304.5
2805 Female, age 91, both hemispheres 1300.7
2100 Male, age 76, both hemispheres 1268.9
Nucleus gracilis
nTPM: 1299.5
2382 Male, age 80, both hemispheres 1315.8
2299 Female, age 85, both hemispheres 1301.9
2627 Male, age 74, both hemispheres 1280.8
Nucleus raphe magnus
nTPM: 1310.9
2455 Male, age 74, both hemispheres 1332.7
2459 Female, age 91, both hemispheres 1323.8
2160 Male, age 61, both hemispheres 1320.3
2328 Male, age 80, both hemispheres 1305.3
2051 Male, age 76, both hemispheres 1293.7
2172 Female, age 85, both hemispheres 1289.4
Nucleus raphe obscurus
nTPM: 1350.5
2800 Male, age 61, midline 1366.4
2845 Female, age 85, midline 1354.4
2142 Male, age 76, midline 1330.6
Nucleus raphe pallidus
nTPM: 1351.9
1924 Male, age 61, midline 1409.2
2183 Male, age 80, midline 1335.7
2145 Male, age 76, midline 1310.9
Nucleus tractus solitarii
nTPM: 1299.8
2144 Female, age 91, right hemisphere 1329.8
2191 Female, age 85, both hemispheres 1312.0
2656 Male, age 76, both hemispheres 1282.2
2307 Male, age 80, both hemispheres 1275.3
Parvicellular reticular nuclei
nTPM: 1334.2
2119 Male, age 80, both hemispheres 1348.1
2095 Male, age 76, both hemispheres 1340.2
2558 Male, age 74, both hemispheres 1314.4
Parvicellular reticular nuclei, medullary
nTPM: 1326.8
2091 Female, age 85, both hemispheres 1337.1
2189 Female, age 91, both hemispheres 1333.2
2181 Male, age 80, left hemisphere 1310.2
Peritrigeminal nucleus
nTPM: 1342.0
2067 Female, age 85, both hemispheres 1383.1
2136 Male, age 76, both hemispheres 1329.8
2179 Male, age 61, both hemispheres 1313.0
Prepositus hypoglossal nucleus
nTPM: 1329.3
2855 Female, age 85, right hemisphere 1329.5
2086 Male, age 80, both hemispheres 1329.1
Spinal trigeminal nucleus, caudal
nTPM: 1301.7
2308 Male, age 80, both hemispheres 1316.1
2312 Male, age 61, both hemispheres 1314.5
2390 Female, age 91, both hemispheres 1299.4
2447 Male, age 76, both hemispheres 1293.0
2642 Male, age 74, both hemispheres 1285.4
Spinal trigeminal nucleus, interpolar
nTPM: 1312.1
2066 Male, age 76, right hemisphere 1346.7
2033 Male, age 80, both hemispheres 1322.0
2386 Female, age 85, both hemispheres 1312.5
2389 Female, age 91, both hemispheres 1300.3
2625 Male, age 61, both hemispheres 1278.8
Spinal vestibular nucleus
nTPM: 1343.7
2384 Male, age 74, both hemispheres 1384.0
2806 Female, age 85, both hemispheres 1346.1
2780 Male, age 80, both hemispheres 1344.8
2186 Female, age 91, both hemispheres 1334.7
2748 Male, age 76, both hemispheres 1331.5
2796 Male, age 61, both hemispheres 1321.1
Ventral medullary reticular nucleus
nTPM: 1338.9
2372 Male, age 61, both hemispheres 1363.4
2060 Male, age 76, both hemispheres 1314.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1350.5
2741 Female, age 85, both hemispheres 1359.7
2302 Female, age 91, both hemispheres 1355.2
2118 Male, age 80, both hemispheres 1353.6
1986 Male, age 76, both hemispheres 1345.0
2180 Male, age 61, both hemispheres 1339.1

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 175.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 175.6
FF:10174-103C3 60 years, female 256.8
FF:10155-103A2 76 years, female 184.5
FF:10038-101F2 18-64 years, mixed 85.6

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 196.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 196.4
Samples: 4

Max nTPM: 240.7
Min nTPM: 149.6
Sample A Female 158.7
Sample B Female 149.6
Sample C Male 240.7
Sample D Male 236.7

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.7
74425523 Antisense, RP_051214_02_E09, Mouse strain C57BL/6J (56 days, male) 4.7
68545854 Antisense, RP_050120_01_F03, Mouse strain C57BL/6J (56 days, male) 0.7

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