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RPS21
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1392.9 nTPM
HPA:1392.9 nTPM
GTEx:1063.1 nTPM
FANTOM5:238.1 Scaled Tags Per Million
Pig:238.4 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 1392.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 1328.0
1981 Female, age 72, midline 1379.1
2565 Male, age 75, midline 1358.0
2048 Male, age 55, midline 1316.6
2194 Female, age 79, both hemispheres 1297.3
2816 Male, age 47, midline 1289.0
Cervical spinal cord, dorsal horn
nTPM: 1370.2
2069 Male, age 47, both hemispheres 1454.8
2173 Female, age 72, unknown 1422.3
2296 Male, age 66, both hemispheres 1407.9
1877 Male, age 55, unknown 1356.7
2297 Male, age 75, both hemispheres 1298.6
2721 Male, age 90, both hemispheres 1281.0
Cervical spinal cord, ventral horn
nTPM: 1392.9
2480 Male, age 75, both hemispheres 1507.1
2098 Female, age 72, unknown 1438.7
2809 Male, age 90, both hemispheres 1434.3
2068 Male, age 55, unknown 1374.0
2295 Male, age 66, both hemispheres 1335.7
2820 Female, age 79, both hemispheres 1267.7

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1063.1
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1063.1
Samples: 159

Max nTPM: 1923.8
Min nTPM: 384.8
Std nTPM: 330.0
Median nTPM: 1009.1
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1923.8
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1917.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1857.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1831.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1816.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1812.3
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1789.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1786.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1753.3
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1711.4
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1709.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1703.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1678.4
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1623.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1607.9
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1584.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1582.7
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1536.7
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1525.5
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1514.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1468.0
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1446.0
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1411.2
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1410.4
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1377.6
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1374.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1366.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1345.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1343.7
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1339.6
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1328.3
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 1320.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1317.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1305.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1299.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1295.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1290.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1278.0
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1276.6
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1236.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1224.9
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1219.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1208.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1195.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1192.9
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1186.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1179.1
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1178.2
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1175.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1171.0
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1157.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1157.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1154.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1154.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1146.8
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1136.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1131.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1128.0
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1127.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1123.4
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1121.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1116.3
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1115.2
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1114.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1109.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1084.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1073.2
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1072.6
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1062.5
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1062.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1054.2
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1054.2
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1054.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 1048.1
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1044.2
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1034.1
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1027.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1017.0
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1014.3
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1009.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 1006.4
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 997.9
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 989.4
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 988.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 983.3
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 975.4
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 961.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 959.7
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 958.7
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 950.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 936.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 936.3
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 931.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 915.5
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 913.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 908.8
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 904.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 899.4
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 888.6
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 885.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 881.2
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 879.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 877.2
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 871.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 870.6
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 866.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 854.6
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 854.6
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 854.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 849.7
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 846.6
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 840.4
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 833.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 829.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 829.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 827.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 827.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 824.6
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 822.3
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 821.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 812.1
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 806.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 803.1
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 797.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 790.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 789.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 787.6
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 786.9
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 785.0
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 778.9
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 776.7
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 775.4
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 775.0
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 774.5
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 774.0
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 773.7
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 765.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 758.4
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 742.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 735.3
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 710.6
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 708.6
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 708.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 704.6
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 702.3
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 698.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 680.9
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 677.2
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 676.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 644.2
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 618.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 611.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 581.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 572.0
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 552.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 544.2
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 536.4
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 535.4
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 384.8
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 238.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 238.1
FF:10181-103D1 60 years, female 312.1
FF:10159-103A6 76 years, female 164.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 238.4
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 238.4
Samples: 4

Max nTPM: 364.1
Min nTPM: 146.9
Sample A Female 179.6
Sample B Female 263.0
Sample C Male 364.1
Sample D Male 146.9
Ventral spinal cord
nTPM: 221.8
Samples: 4

Max nTPM: 257.4
Min nTPM: 178.4
Sample A Female 178.4
Sample B Female 257.4
Sample C Male 249.0
Sample D Male 202.3

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