We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
MARCKSL1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • MARCKSL1
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:467.9 nTPM
HPA:467.9 nTPM
GTEx:999.0 nTPM
FANTOM5:660.6 Scaled Tags Per Million
Pig:1619.4 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 467.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 438.7
1981 Female, age 72, midline 476.7
2816 Male, age 47, midline 463.4
2194 Female, age 79, both hemispheres 447.8
2048 Male, age 55, midline 403.0
2565 Male, age 75, midline 402.7
Cervical spinal cord, dorsal horn
nTPM: 466.3
2296 Male, age 66, both hemispheres 699.7
2173 Female, age 72, unknown 595.9
2069 Male, age 47, both hemispheres 425.0
1877 Male, age 55, unknown 418.2
2721 Male, age 90, both hemispheres 347.7
2297 Male, age 75, both hemispheres 311.6
Cervical spinal cord, ventral horn
nTPM: 467.9
2068 Male, age 55, unknown 507.6
2820 Female, age 79, both hemispheres 499.8
2098 Female, age 72, unknown 475.0
2295 Male, age 66, both hemispheres 464.3
2809 Male, age 90, both hemispheres 431.3
2480 Male, age 75, both hemispheres 429.2

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 999.0
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 999.0
Samples: 159

Max nTPM: 2099.4
Min nTPM: 184.2
Std nTPM: 409.5
Median nTPM: 960.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 2099.4
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 2036.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1907.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1891.9
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1866.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 1799.0
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1758.5
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1695.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1678.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1656.5
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1646.0
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1627.8
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1601.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1596.5
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1590.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1561.5
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1555.6
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1535.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1535.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1524.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1505.8
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1457.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1457.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 1445.8
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 1443.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1435.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1425.9
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1413.2
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 1392.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1389.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1378.4
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1376.7
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 1346.1
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1330.9
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1328.6
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1327.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1327.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1322.9
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1322.0
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1312.6
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1306.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1306.1
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1301.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1301.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1297.5
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 1276.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1267.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1266.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 1259.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 1239.5
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1221.1
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1216.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1165.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1138.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1123.3
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1119.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1108.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1102.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1101.2
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1099.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1098.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1080.4
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1076.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1058.0
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1049.9
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1039.8
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 1037.9
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1037.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1030.7
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1020.5
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1018.8
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1015.3
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1003.1
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 992.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 988.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 987.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 981.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 978.6
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 969.4
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 960.4
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 951.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 940.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 929.6
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 928.0
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 916.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 901.5
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 900.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 898.2
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 889.4
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 880.7
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 876.8
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 869.1
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 865.2
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 854.7
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 842.6
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 840.9
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 830.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 828.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 815.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 797.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 797.3
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 784.8
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 776.0
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 773.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 773.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 767.0
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 766.1
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 759.1
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 750.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 749.5
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 748.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 739.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 738.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 734.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 727.2
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 726.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 717.1
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 717.1
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 714.7
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 711.1
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 710.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 703.6
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 700.1
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 691.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 688.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 683.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 675.7
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 640.1
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 634.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 624.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 623.5
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 609.5
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 607.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 588.0
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 585.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 567.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 567.8
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 538.4
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 536.1
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 533.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 517.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 508.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 501.2
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 485.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 484.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 473.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 438.2
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 429.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 406.3
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 397.9
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 387.4
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 380.7
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 377.8
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 307.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 275.3
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 273.8
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 230.1
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 186.7
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 184.2
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 660.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 660.6
FF:10181-103D1 60 years, female 945.9
FF:10159-103A6 76 years, female 375.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1619.4
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 1195.3
Samples: 4

Max nTPM: 1279.9
Min nTPM: 1109.5
Sample A Female 1109.5
Sample B Female 1244.2
Sample C Male 1147.5
Sample D Male 1279.9
Ventral spinal cord
nTPM: 1619.4
Samples: 4

Max nTPM: 2218.2
Min nTPM: 1302.2
Sample A Female 1431.5
Sample B Female 1525.6
Sample C Male 1302.2
Sample D Male 2218.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.