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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:409.8 nTPM
HPA:409.8 nTPM
FANTOM5:278.0 Scaled Tags Per Million
Allen mouse:14.8 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 409.8
Sample id Sample description nTPM
Area postrema
nTPM: 331.6
2306 Male, age 80, both hemispheres 349.1
2054 Male, age 76, both hemispheres 328.5
2799 Male, age 61, both hemispheres 317.2
Cuneate nuclei
nTPM: 333.0
2381 Male, age 80, both hemispheres 344.6
2131 Male, age 76, both hemispheres 343.4
2376 Male, age 61, both hemispheres 311.0
Dorsal medullary reticular nucleus
nTPM: 346.4
2373 Male, age 61, both hemispheres 359.6
2040 Female, age 85, both hemispheres 346.5
2088 Male, age 76, both hemispheres 333.0
Dorsal motor vagal complex
nTPM: 344.9
2133 Female, age 91, both hemispheres 374.7
2643 Male, age 74, both hemispheres 359.1
2844 Male, age 55, unknown 356.1
2000 Male, age 74, unknown 347.8
2813 Female, age 72, unknown 347.6
2185 Male, age 76, both hemispheres 334.8
2797 Male, age 61, both hemispheres 322.4
2807 Female, age 85, both hemispheres 316.6
Gigantocellular reticular nuclei, medullary
nTPM: 343.1
2314 Male, age 61, both hemispheres 382.6
1876 Female, age 85, both hemispheres 340.6
2462 Male, age 74, both hemispheres 339.5
2310 Male, age 80, both hemispheres 337.8
2022 Male, age 76, right hemisphere 336.0
2387 Female, age 91, both hemispheres 322.4
Gigantocellular reticular nuclei, pars
nTPM: 356.1
2336 Male, age 61, both hemispheres 364.4
2084 Female, age 85, both hemispheres 363.5
2330 Male, age 80, both hemispheres 360.0
2168 Male, age 76, both hemispheres 350.7
2706 Male, age 80, both hemispheres 342.2
Inferior olive
nTPM: 352.4
2085 Female, age 85, both hemispheres 367.4
2628 Female, age 91, both hemispheres 366.5
2563 Male, age 74, both hemispheres 366.1
2178 Male, age 61, both hemispheres 352.6
2379 Male, age 80, both hemispheres 309.4
Lateral medullary reticular nucleus
nTPM: 354.3
2374 Male, age 61, both hemispheres 365.7
2305 Male, age 74, both hemispheres 364.7
2804 Female, age 91, both hemispheres 361.0
2190 Female, age 85, both hemispheres 346.2
2044 Male, age 76, both hemispheres 345.6
2852 Male, age 80, both hemispheres 342.4
Medial vestibular nucleus
nTPM: 358.2
2093 Male, age 80, both hemispheres 373.6
2801 Male, age 74, both hemispheres 365.7
2624 Male, age 61, both hemispheres 359.3
2803 Female, age 91, both hemispheres 356.0
2134 Male, age 76, both hemispheres 355.8
2743 Female, age 85, both hemispheres 338.8
Motor hypoglossal nucleus
nTPM: 360.4
2132 Female, age 85, both hemispheres 393.8
2125 Female, age 91, both hemispheres 382.5
2182 Male, age 80, both hemispheres 353.6
2461 Male, age 61, both hemispheres 346.0
2277 Male, age 76, both hemispheres 325.9
Nucleus ambiguus
nTPM: 409.8
2096 Female, age 85, both hemispheres 455.4
2071 Male, age 76, both hemispheres 364.1
Nucleus cuneatus
nTPM: 331.7
2564 Male, age 74, both hemispheres 348.9
2100 Male, age 76, both hemispheres 338.8
2808 Female, age 85, both hemispheres 332.3
2805 Female, age 91, both hemispheres 332.2
2562 Male, age 61, both hemispheres 320.4
2380 Male, age 80, both hemispheres 317.8
Nucleus gracilis
nTPM: 340.1
2627 Male, age 74, both hemispheres 357.6
2382 Male, age 80, both hemispheres 331.6
2299 Female, age 85, both hemispheres 331.1
Nucleus raphe magnus
nTPM: 364.3
2160 Male, age 61, both hemispheres 399.6
2455 Male, age 74, both hemispheres 382.2
2172 Female, age 85, both hemispheres 380.1
2328 Male, age 80, both hemispheres 360.3
2051 Male, age 76, both hemispheres 334.8
2459 Female, age 91, both hemispheres 328.9
Nucleus raphe obscurus
nTPM: 348.7
2845 Female, age 85, midline 363.3
2800 Male, age 61, midline 341.9
2142 Male, age 76, midline 340.9
Nucleus raphe pallidus
nTPM: 357.5
1924 Male, age 61, midline 364.6
2183 Male, age 80, midline 357.8
2145 Male, age 76, midline 350.0
Nucleus tractus solitarii
nTPM: 333.2
2656 Male, age 76, both hemispheres 346.2
2307 Male, age 80, both hemispheres 336.7
2191 Female, age 85, both hemispheres 329.3
2144 Female, age 91, right hemisphere 320.4
Parvicellular reticular nuclei
nTPM: 349.4
2119 Male, age 80, both hemispheres 361.7
2095 Male, age 76, both hemispheres 357.5
2558 Male, age 74, both hemispheres 329.1
Parvicellular reticular nuclei, medullary
nTPM: 366.5
2189 Female, age 91, both hemispheres 367.6
2181 Male, age 80, left hemisphere 366.5
2091 Female, age 85, both hemispheres 365.3
Peritrigeminal nucleus
nTPM: 367.5
2067 Female, age 85, both hemispheres 372.9
2136 Male, age 76, both hemispheres 367.5
2179 Male, age 61, both hemispheres 362.0
Prepositus hypoglossal nucleus
nTPM: 353.0
2855 Female, age 85, right hemisphere 360.7
2086 Male, age 80, both hemispheres 345.3
Spinal trigeminal nucleus, caudal
nTPM: 353.6
2642 Male, age 74, both hemispheres 365.2
2390 Female, age 91, both hemispheres 361.8
2308 Male, age 80, both hemispheres 353.2
2312 Male, age 61, both hemispheres 346.1
2447 Male, age 76, both hemispheres 341.6
Spinal trigeminal nucleus, interpolar
nTPM: 351.3
2066 Male, age 76, right hemisphere 376.1
2389 Female, age 91, both hemispheres 359.8
2625 Male, age 61, both hemispheres 359.5
2386 Female, age 85, both hemispheres 331.4
2033 Male, age 80, both hemispheres 329.6
Spinal vestibular nucleus
nTPM: 353.7
2186 Female, age 91, both hemispheres 367.0
2748 Male, age 76, both hemispheres 359.3
2780 Male, age 80, both hemispheres 356.2
2806 Female, age 85, both hemispheres 354.2
2796 Male, age 61, both hemispheres 351.7
2384 Male, age 74, both hemispheres 333.6
Ventral medullary reticular nucleus
nTPM: 342.2
2060 Male, age 76, both hemispheres 357.9
2372 Male, age 61, both hemispheres 326.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 356.8
2180 Male, age 61, both hemispheres 368.7
2118 Male, age 80, both hemispheres 358.3
1986 Male, age 76, both hemispheres 358.1
2741 Female, age 85, both hemispheres 351.5
2302 Female, age 91, both hemispheres 347.2

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 278.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 278.0
FF:10174-103C3 60 years, female 350.8
FF:10038-101F2 18-64 years, mixed 242.2
FF:10155-103A2 76 years, female 240.9

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 14.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 14.8
69446589 Antisense, RP_050419_01_E08, Mouse strain C57BL/6J (56 days, male) 14.8

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