HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:2424.9 nTPM
HPA:2424.9 nTPM
GTEx:1670.5 nTPM
FANTOM5:2293.5 Scaled Tags Per Million
Pig:378.1 nTPM
Mouse:249.1 nTPM
Allen mouse:7.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057100Antibody CAB002053Antibody CAB040560
Glial cells HighHighHigh
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 2424.9
Sample id Sample description nTPM
Hippocampus
nTPM: 2354.0
2529 Female, age 94, left hemisphere 2550.7
1911 Female, age 85, right hemisphere 2374.8
2621 Female, age 67, right hemisphere 2370.9
1855 Male, age 76, left hemisphere 2301.6
1898 Male, age 80, left hemisphere 2280.6
2148 Female, age 91, left hemisphere 2245.5
Dentate gyrus
nTPM: 2306.1
2010 Male, age 76, both hemispheres 2550.0
2530 Female, age 94, left hemisphere 2393.6
2528 Male, age 74, both hemispheres 2307.3
2246 Female, age 85, both hemispheres 2257.2
2531 Female, age 67, both hemispheres 2203.2
1927 Female, age 91, both hemispheres 2124.9
Entorhinal gyrus
nTPM: 2303.7
2117 Female, age 91, right hemisphere 2608.8
2764 Male, age 80, right hemisphere 2324.1
1787 Male, age 76, left hemisphere 2312.2
2686 Male, age 75, right hemisphere 2228.5
1938 Female, age 85, left hemisphere 2203.8
2613 Female, age 94, left hemisphere 2145.1
Hippocampus, CA1
nTPM: 2238.1
2527 Male, age 74, both hemispheres 2286.2
2045 Male, age 76, both hemispheres 2279.8
2082 Female, age 91, right hemisphere 2261.1
1873 Female, age 85, both hemispheres 2254.3
2749 Male, age 80, left hemisphere 2109.3
Hippocampus, CA2
nTPM: 2284.0
2249 Male, age 74, both hemispheres 2430.3
2113 Female, age 91, right hemisphere 2303.3
1963 Male, age 80, left hemisphere 2287.4
1940 Female, age 85, left hemisphere 2262.6
2437 Female, age 94, left hemisphere 2248.0
1892 Male, age 76, both hemispheres 2172.2
Hippocampus, CA3
nTPM: 2232.0
1891 Female, age 85, both hemispheres 2431.9
1867 Male, age 76, both hemispheres 2316.3
2620 Female, age 94, left hemisphere 2269.8
2436 Male, age 74, both hemispheres 2212.5
2137 Male, age 80, left hemisphere 2090.3
2861 Female, age 67, both hemispheres 2071.1
Parahippocampal cortex
nTPM: 2249.6
2018 Male, age 76, both hemispheres 2432.2
2532 Female, age 72, left hemisphere 2387.4
1990 Female, age 91, right hemisphere 2304.4
2692 Male, age 74, both hemispheres 2292.2
2245 Female, age 91, both hemispheres 2278.4
1850 Male, age 80, both hemispheres 2226.8
1933 Female, age 85, both hemispheres 2191.7
2250 Female, age 67, right hemisphere 2154.2
2622 Female, age 67, right hemisphere 2116.3
2693 Female, age 94, both hemispheres 2112.0
Perirhinal gyrus
nTPM: 2132.6
2521 Female, age 94, right hemisphere 2204.4
2848 Male, age 76, right hemisphere 2203.7
1794 Male, age 80, right hemisphere 2102.7
1847 Female, age 91, left hemisphere 2078.9
1841 Female, age 85, right hemisphere 2073.2
Subiculum
nTPM: 2424.9
2042 Male, age 76, both hemispheres 2680.0
1901 Male, age 80, both hemispheres 2517.7
2438 Female, age 94, left hemisphere 2390.0
1977 Female, age 85, both hemispheres 2372.5
2619 Male, age 74, both hemispheres 2317.4
2729 Female, age 91, right hemisphere 2272.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1670.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1670.5
Samples: 197

Max nTPM: 6767.3
Min nTPM: 258.0
Std nTPM: 1106.3
Median nTPM: 1379.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 6767.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 6278.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 5716.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 5181.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 4860.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 4817.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 4675.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 4478.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 4437.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 4149.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 3636.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 2293.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 2293.5
FF:10153-102I9 76 years, female 2728.7
FF:10169-103B7 60 years, female 1858.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 378.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 378.1
Samples: 4

Max nTPM: 626.7
Min nTPM: 153.8
Sample A Female 626.7
Sample B Female 258.3
Sample C Male 473.5
Sample D Male 153.8
Entorhinal cortex
nTPM: 155.6
Samples: 4

Max nTPM: 213.5
Min nTPM: 129.6
Sample A Female 139.6
Sample B Female 213.5
Sample C Male 139.8
Sample D Male 129.6
Subiculum
nTPM: 158.4
Samples: 4

Max nTPM: 180.0
Min nTPM: 138.3
Sample A Female 180.0
Sample B Female 159.7
Sample C Male 138.3
Sample D Male 155.6
Ventral hippocampus
nTPM: 250.5
Samples: 4

Max nTPM: 324.9
Min nTPM: 158.8
Sample A Female 266.5
Sample B Female 158.8
Sample C Male 251.6
Sample D Male 324.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 249.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 163.1
Samples: 4

Max nTPM: 189.7
Min nTPM: 128.4
Sample A Male 189.7
Sample B Male 168.0
Sample C Female 166.2
Sample D Female 128.4
Hippocampal formation
nTPM: 249.1
Samples: 4

Max nTPM: 354.9
Min nTPM: 186.8
Sample A Male 186.8
Sample B Male 200.6
Sample C Female 354.9
Sample D Female 254.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.4
72182998 Antisense, RP_050927_03_A08, Mouse strain C57BL/6J (56 days, male) 7.4
74357575 Antisense, RP_050927_03_A08, Mouse strain C57BL/6J (56 days, male) 5.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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