PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:282.9 nTPM
HPA:282.9 nTPM
FANTOM5:1148.4 Scaled Tags Per Million
Pig:287.7 nTPM
Mouse:627.9 nTPM
Allen mouse:20.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 282.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 226.6
2188 Female, age 91, both hemispheres 264.6
2301 Female, age 85, both hemispheres 230.8
2090 Male, age 80, both hemispheres 217.9
1984 Male, age 76, both hemispheres 193.0
Area postrema
nTPM: 193.0
2799 Male, age 61, both hemispheres 197.1
2054 Male, age 76, both hemispheres 194.1
2306 Male, age 80, both hemispheres 187.7
Cuneate nuclei
nTPM: 205.9
2376 Male, age 61, both hemispheres 221.3
2381 Male, age 80, both hemispheres 209.6
2131 Male, age 76, both hemispheres 186.8
Dorsal cochlear nucleus
nTPM: 230.4
2802 Male, age 74, right hemisphere 282.7
2187 Female, age 91, both hemispheres 258.5
2378 Male, age 80, both hemispheres 215.0
2058 Male, age 76, both hemispheres 208.1
2370 Male, age 61, both hemispheres 187.5
Dorsal medullary reticular nucleus
nTPM: 218.9
2040 Female, age 85, both hemispheres 253.3
2373 Male, age 61, both hemispheres 205.3
2088 Male, age 76, both hemispheres 198.1
Dorsal motor vagal complex
nTPM: 209.7
2133 Female, age 91, both hemispheres 237.8
2000 Male, age 74, unknown 226.8
2844 Male, age 55, unknown 223.7
2813 Female, age 72, unknown 217.5
2643 Male, age 74, both hemispheres 205.2
2797 Male, age 61, both hemispheres 199.0
2807 Female, age 85, both hemispheres 183.9
2185 Male, age 76, both hemispheres 183.5
Dorsal tegmental nucleus
nTPM: 213.7
2326 Male, age 74, both hemispheres 265.8
2083 Male, age 80, both hemispheres 222.2
1936 Male, age 76, left hemisphere 207.2
2358 Male, age 61, both hemispheres 159.7
Dorsolateral tegmental area
nTPM: 215.5
2751 Female, age 85, both hemispheres 258.4
2654 Male, age 80, both hemispheres 231.9
2360 Male, age 74, both hemispheres 228.2
2141 Male, age 76, both hemispheres 196.3
2337 Male, age 61, both hemispheres 162.8
Gigantocellular reticular nuclei, medullary
nTPM: 229.9
2387 Female, age 91, both hemispheres 247.8
1876 Female, age 85, both hemispheres 246.5
2314 Male, age 61, both hemispheres 233.1
2022 Male, age 76, right hemisphere 222.5
2462 Male, age 74, both hemispheres 217.8
2310 Male, age 80, both hemispheres 211.5
Gigantocellular reticular nuclei, pars
nTPM: 218.4
2168 Male, age 76, both hemispheres 270.2
2084 Female, age 85, both hemispheres 219.6
2336 Male, age 61, both hemispheres 210.7
2706 Male, age 80, both hemispheres 200.2
2330 Male, age 80, both hemispheres 191.4
Inferior olive
nTPM: 230.0
2563 Male, age 74, both hemispheres 255.9
2085 Female, age 85, both hemispheres 250.6
2178 Male, age 61, both hemispheres 219.0
2379 Male, age 80, both hemispheres 216.8
2628 Female, age 91, both hemispheres 207.8
Kolliker-Fuse nucleus
nTPM: 226.3
2793 Female, age 91, left hemisphere 230.2
2315 Male, age 76, right hemisphere 225.0
2163 Male, age 80, both hemispheres 223.8
Lateral lemniscal nuclei
nTPM: 247.3
2169 Male, age 76, both hemispheres 278.5
2036 Male, age 80, both hemispheres 269.9
2746 Female, age 85, left hemisphere 250.2
2453 Male, age 74, right hemisphere 222.1
2320 Female, age 91, left hemisphere 215.6
Lateral medullary reticular nucleus
nTPM: 248.7
2305 Male, age 74, both hemispheres 331.5
2804 Female, age 91, both hemispheres 254.5
2044 Male, age 76, both hemispheres 241.1
2190 Female, age 85, both hemispheres 232.0
2374 Male, age 61, both hemispheres 216.9
2852 Male, age 80, both hemispheres 215.9
Lateral parabrachial nucleus
nTPM: 228.8
2139 Female, age 85, right hemisphere 254.0
2013 Male, age 80, both hemispheres 236.9
2792 Male, age 76, both hemispheres 231.2
2790 Male, age 61, both hemispheres 192.9
Lateral vestibular nucleus
nTPM: 211.1
2311 Male, age 80, both hemispheres 217.2
2184 Male, age 76, both hemispheres 205.0
Locus coeruleus
nTPM: 229.9
2014 Male, age 55, unknown 259.7
2788 Male, age 74, unknown 253.5
2720 Male, age 74, both hemispheres 234.8
2123 Female, age 91, both hemispheres 232.7
2317 Female, age 72, unknown 220.3
2162 Male, age 80, both hemispheres 209.5
1980 Male, age 76, both hemispheres 198.6
Medial olivary nucleus
nTPM: 240.4
2138 Female, age 91, both hemispheres 258.9
1943 Male, age 61, both hemispheres 248.0
1962 Male, age 76, both hemispheres 244.1
2851 Male, age 80, both hemispheres 210.6
Medial parabrachial nucleus
nTPM: 227.9
2170 Female, age 91, both hemispheres 285.1
2854 Male, age 80, both hemispheres 249.7
2463 Female, age 85, right hemisphere 213.7
2786 Male, age 76, both hemispheres 204.8
2156 Male, age 61, both hemispheres 186.5
Medial periolivary nuclei
nTPM: 260.5
2063 Male, age 76, both hemispheres 302.4
2791 Male, age 74, right hemisphere 282.3
2171 Female, age 85, both hemispheres 279.5
2081 Male, age 80, both hemispheres 225.8
2458 Female, age 91, both hemispheres 212.2
Medial vestibular nucleus
nTPM: 238.3
2801 Male, age 74, both hemispheres 290.7
2803 Female, age 91, both hemispheres 263.4
2743 Female, age 85, both hemispheres 234.4
2093 Male, age 80, both hemispheres 228.3
2134 Male, age 76, both hemispheres 218.4
2624 Male, age 61, both hemispheres 194.9
Motor facial nucleus
nTPM: 243.7
2062 Male, age 76, both hemispheres 304.0
2365 Male, age 74, right hemisphere 256.3
2697 Female, age 85, both hemispheres 233.4
2795 Female, age 91, both hemispheres 226.7
2126 Male, age 61, both hemispheres 226.3
2327 Male, age 80, both hemispheres 215.3
Motor hypoglossal nucleus
nTPM: 221.8
2125 Female, age 91, both hemispheres 271.1
2132 Female, age 85, both hemispheres 244.9
2461 Male, age 61, both hemispheres 211.7
2182 Male, age 80, both hemispheres 194.2
2277 Male, age 76, both hemispheres 186.8
Motor trigeminal nucleus
nTPM: 213.1
2079 Male, age 80, both hemispheres 237.1
2560 Male, age 74, both hemispheres 218.9
2321 Female, age 91, both hemispheres 216.0
2309 Male, age 76, both hemispheres 212.3
2335 Male, age 61, both hemispheres 181.4
Nuclei of the trapezoid body
nTPM: 267.8
2159 Male, age 61, both hemispheres 315.3
1983 Male, age 76, both hemispheres 294.9
2735 Female, age 85, both hemispheres 277.7
2166 Male, age 80, both hemispheres 230.9
2368 Female, age 91, both hemispheres 220.5
Nucleus ambiguus
nTPM: 201.9
2071 Male, age 76, both hemispheres 232.8
2096 Female, age 85, both hemispheres 170.9
Nucleus cuneatus
nTPM: 211.3
2564 Male, age 74, both hemispheres 243.4
2380 Male, age 80, both hemispheres 221.3
2808 Female, age 85, both hemispheres 218.8
2805 Female, age 91, both hemispheres 204.1
2562 Male, age 61, both hemispheres 192.8
2100 Male, age 76, both hemispheres 187.6
Nucleus gracilis
nTPM: 210.8
2627 Male, age 74, both hemispheres 251.1
2382 Male, age 80, both hemispheres 206.7
2299 Female, age 85, both hemispheres 174.6
Nucleus raphe magnus
nTPM: 258.9
2160 Male, age 61, both hemispheres 334.3
2172 Female, age 85, both hemispheres 263.1
2051 Male, age 76, both hemispheres 254.1
2455 Male, age 74, both hemispheres 251.7
2328 Male, age 80, both hemispheres 225.6
2459 Female, age 91, both hemispheres 224.4
Nucleus raphe obscurus
nTPM: 250.9
2845 Female, age 85, midline 285.3
2800 Male, age 61, midline 251.9
2142 Male, age 76, midline 215.3
Nucleus raphe pallidus
nTPM: 242.0
1924 Male, age 61, midline 265.2
2183 Male, age 80, midline 233.9
2145 Male, age 76, midline 226.8
Nucleus tractus solitarii
nTPM: 207.5
2144 Female, age 91, right hemisphere 288.4
2656 Male, age 76, both hemispheres 211.0
2191 Female, age 85, both hemispheres 171.7
2307 Male, age 80, both hemispheres 159.0
Paramedian reticular nucleus
nTPM: 253.4
2050 Female, age 85, both hemispheres 274.9
2052 Male, age 76, both hemispheres 252.4
2057 Male, age 80, both hemispheres 243.6
2313 Male, age 61, both hemispheres 242.7
Parvicellular reticular nuclei
nTPM: 221.7
2095 Male, age 76, both hemispheres 240.7
2119 Male, age 80, both hemispheres 231.7
2558 Male, age 74, both hemispheres 192.8
Parvicellular reticular nuclei, medullary
nTPM: 220.9
2189 Female, age 91, both hemispheres 237.5
2181 Male, age 80, left hemisphere 215.2
2091 Female, age 85, both hemispheres 209.9
Peritrigeminal nucleus
nTPM: 235.0
2179 Male, age 61, both hemispheres 246.7
2136 Male, age 76, both hemispheres 241.1
2067 Female, age 85, both hemispheres 217.4
Pontine nuclei
nTPM: 282.9
2727 Male, age 61, right hemisphere 346.6
1863 Male, age 55, unknown 324.6
2109 Female, age 72, unknown 298.2
2454 Male, age 74, left hemisphere 294.7
2787 Female, age 85, both hemispheres 272.1
1968 Male, age 76, left hemisphere 264.3
2319 Female, age 91, both hemispheres 254.8
2115 Male, age 80, left hemisphere 207.7
Pontine raphe nucleus
nTPM: 247.0
2122 Female, age 85, midline 272.8
2853 Male, age 76, midline 221.3
Posteroventral cochlear nucleus
nTPM: 235.0
2135 Female, age 91, both hemispheres 281.1
2341 Male, age 80, both hemispheres 247.1
2752 Female, age 85, both hemispheres 241.5
2070 Male, age 76, both hemispheres 210.8
2371 Male, age 61, both hemispheres 194.4
Prepositus hypoglossal nucleus
nTPM: 237.6
2855 Female, age 85, right hemisphere 281.1
2086 Male, age 80, both hemispheres 194.0
Principal sensory trigeminal nucleus
nTPM: 244.8
2158 Male, age 61, both hemispheres 274.7
2008 Male, age 80, left hemisphere 271.7
2367 Female, age 91, left hemisphere 234.9
2324 Male, age 76, both hemispheres 197.9
Reticular pontine nucleus, caudal
nTPM: 237.6
2092 Male, age 76, both hemispheres 254.2
2559 Male, age 74, both hemispheres 253.9
2457 Female, age 91, both hemispheres 232.3
2332 Male, age 80, right hemisphere 210.0
Reticular pontine nucleus, oral
nTPM: 246.7
2361 Male, age 74, both hemispheres 276.8
2012 Female, age 85, both hemispheres 264.6
1939 Male, age 80, both hemispheres 240.1
2366 Female, age 91, both hemispheres 235.1
2167 Male, age 76, both hemispheres 217.0
Reticulotegmental nucleus
nTPM: 226.1
2325 Male, age 76, both hemispheres 241.4
2322 Female, age 91, both hemispheres 231.4
2452 Male, age 74, both hemispheres 221.9
2333 Male, age 80, both hemispheres 209.7
Spinal trigeminal nucleus, caudal
nTPM: 217.7
2390 Female, age 91, both hemispheres 245.8
2312 Male, age 61, both hemispheres 222.7
2642 Male, age 74, both hemispheres 210.9
2447 Male, age 76, both hemispheres 206.7
2308 Male, age 80, both hemispheres 202.4
Spinal trigeminal nucleus, interpolar
nTPM: 241.3
2066 Male, age 76, right hemisphere 275.3
2386 Female, age 85, both hemispheres 239.1
2033 Male, age 80, both hemispheres 233.8
2389 Female, age 91, both hemispheres 233.3
2625 Male, age 61, both hemispheres 224.9
Spinal trigeminal nucleus, oral
nTPM: 209.4
2737 Female, age 85, both hemispheres 216.2
2164 Male, age 80, both hemispheres 206.3
1978 Male, age 76, both hemispheres 205.7
Spinal vestibular nucleus
nTPM: 234.4
2384 Male, age 74, both hemispheres 265.1
2806 Female, age 85, both hemispheres 258.5
2186 Female, age 91, both hemispheres 233.1
2780 Male, age 80, both hemispheres 226.2
2748 Male, age 76, both hemispheres 219.5
2796 Male, age 61, both hemispheres 204.2
Subcoeruleus area
nTPM: 238.5
2369 Female, age 85, left hemisphere 257.5
1958 Male, age 80, both hemispheres 255.3
2089 Male, age 76, left hemisphere 238.0
2451 Male, age 74, both hemispheres 226.3
2323 Female, age 91, left hemisphere 215.4
Superior olive
nTPM: 252.7
1875 Female, age 85, both hemispheres 296.1
2020 Male, age 76, both hemispheres 272.8
2364 Male, age 74, right hemisphere 271.3
2329 Male, age 80, right hemisphere 218.4
2561 Female, age 91, both hemispheres 204.9
Superior vestibular nucleus
nTPM: 234.9
2383 Male, age 74, both hemispheres 267.1
2015 Male, age 80, both hemispheres 241.7
2061 Male, age 76, both hemispheres 195.9
Ventral medullary reticular nucleus
nTPM: 224.2
2372 Male, age 61, both hemispheres 239.9
2060 Male, age 76, both hemispheres 208.5
Ventral periolivary nuclei
nTPM: 250.8
2023 Male, age 76, both hemispheres 280.7
2130 Female, age 85, both hemispheres 257.7
2165 Male, age 80, both hemispheres 254.2
2794 Female, age 91, left hemisphere 210.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 234.5
2180 Male, age 61, both hemispheres 242.6
2741 Female, age 85, both hemispheres 237.9
2302 Female, age 91, both hemispheres 236.0
1986 Male, age 76, both hemispheres 233.7
2118 Male, age 80, both hemispheres 222.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 229.2
1959 Male, age 76, both hemispheres 257.4
2840 Female, age 85, both hemispheres 242.5
2449 Male, age 74, both hemispheres 234.0
2161 Male, age 80, both hemispheres 230.5
2456 Female, age 91, both hemispheres 217.9
2359 Male, age 61, both hemispheres 192.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 1148.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 631.6
FF:10165-103B3 76 years, female 641.4
FF:10182-103D2 60 years, female 621.8
Medulla oblongata
Scaled Tags Per Million: 590.5
FF:10038-101F2 18-64 years, mixed 731.1
FF:10155-103A2 76 years, female 560.0
FF:10174-103C3 60 years, female 480.3
Pons
Scaled Tags Per Million: 1148.4
FF:10033-101E6 18-54 years, mixed 1148.4

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 287.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 248.6
Samples: 4

Max nTPM: 258.6
Min nTPM: 226.3
Sample A Female 258.6
Sample B Female 226.3
Sample C Male 254.2
Sample D Male 255.2
Pons
nTPM: 287.7
Samples: 4

Max nTPM: 349.5
Min nTPM: 224.6
Sample A Female 274.1
Sample B Female 224.6
Sample C Male 349.5
Sample D Male 302.4

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 627.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 627.9
Samples: 4

Max nTPM: 648.0
Min nTPM: 606.0
Sample A Male 606.0
Sample B Male 648.0
Sample C Female 620.1
Sample D Female 637.4

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 20.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 20.2
67752306 Antisense, RP_040922_01_D04, Mouse strain C57BL/6J (56 days, male) 23.0
77620375 Antisense, RP_070205_01_D08, Mouse strain C57BL/6J (56 days, male) 17.4
77413696 Antisense, RP_070205_01_D08, Mouse strain C57BL/6J (56 days, male) 16.1
68196968 Antisense, RP_040922_01_D04, Mouse strain C57BL/6J (56 days, male) 13.3
Pons
Expression energy: 19.6
67752306 Antisense, RP_040922_01_D04, Mouse strain C57BL/6J (56 days, male) 21.9
77413696 Antisense, RP_070205_01_D08, Mouse strain C57BL/6J (56 days, male) 17.4
77620375 Antisense, RP_070205_01_D08, Mouse strain C57BL/6J (56 days, male) 16.5
68196968 Antisense, RP_040922_01_D04, Mouse strain C57BL/6J (56 days, male) 14.9

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