PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:10230.8 nTPM
HPA:10230.8 nTPM
FANTOM5:7264.0 Scaled Tags Per Million
Pig:2416.1 nTPM
Mouse:763.5 nTPM
Allen mouse:13.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 10230.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 5969.2
1984 Male, age 76, both hemispheres 6446.4
2090 Male, age 80, both hemispheres 6030.1
2301 Female, age 85, both hemispheres 5852.8
2188 Female, age 91, both hemispheres 5547.3
Area postrema
nTPM: 10230.8
2799 Male, age 61, both hemispheres 14738.6
2306 Male, age 80, both hemispheres 8278.3
2054 Male, age 76, both hemispheres 7675.6
Cuneate nuclei
nTPM: 6081.8
2376 Male, age 61, both hemispheres 6276.2
2131 Male, age 76, both hemispheres 6110.3
2381 Male, age 80, both hemispheres 5858.8
Dorsal cochlear nucleus
nTPM: 6084.3
2370 Male, age 61, both hemispheres 6486.4
2058 Male, age 76, both hemispheres 6481.2
2187 Female, age 91, both hemispheres 5946.2
2802 Male, age 74, right hemisphere 5840.0
2378 Male, age 80, both hemispheres 5667.5
Dorsal medullary reticular nucleus
nTPM: 6166.8
2040 Female, age 85, both hemispheres 6280.5
2088 Male, age 76, both hemispheres 6227.6
2373 Male, age 61, both hemispheres 5992.4
Dorsal motor vagal complex
nTPM: 7362.3
2797 Male, age 61, both hemispheres 8892.9
2185 Male, age 76, both hemispheres 7774.9
2813 Female, age 72, unknown 7714.1
2000 Male, age 74, unknown 7600.4
2643 Male, age 74, both hemispheres 7146.8
2844 Male, age 55, unknown 6843.6
2133 Female, age 91, both hemispheres 6733.8
2807 Female, age 85, both hemispheres 6192.2
Dorsal tegmental nucleus
nTPM: 6734.7
2358 Male, age 61, both hemispheres 7440.0
1936 Male, age 76, left hemisphere 6705.7
2083 Male, age 80, both hemispheres 6476.2
2326 Male, age 74, both hemispheres 6316.8
Dorsolateral tegmental area
nTPM: 6723.0
2360 Male, age 74, both hemispheres 8154.6
2337 Male, age 61, both hemispheres 6569.9
2141 Male, age 76, both hemispheres 6530.5
2654 Male, age 80, both hemispheres 6305.0
2751 Female, age 85, both hemispheres 6055.2
Gigantocellular reticular nuclei, medullary
nTPM: 6083.9
2462 Male, age 74, both hemispheres 7048.3
2314 Male, age 61, both hemispheres 6529.7
1876 Female, age 85, both hemispheres 6306.0
2022 Male, age 76, right hemisphere 5792.2
2387 Female, age 91, both hemispheres 5479.9
2310 Male, age 80, both hemispheres 5347.5
Gigantocellular reticular nuclei, pars
nTPM: 5964.5
2084 Female, age 85, both hemispheres 6412.3
2336 Male, age 61, both hemispheres 6174.2
2168 Male, age 76, both hemispheres 5781.7
2330 Male, age 80, both hemispheres 5753.4
2706 Male, age 80, both hemispheres 5700.8
Inferior olive
nTPM: 7011.4
2085 Female, age 85, both hemispheres 7425.5
2563 Male, age 74, both hemispheres 7245.1
2628 Female, age 91, both hemispheres 6969.6
2178 Male, age 61, both hemispheres 6852.0
2379 Male, age 80, both hemispheres 6564.9
Kolliker-Fuse nucleus
nTPM: 7269.7
2315 Male, age 76, right hemisphere 10190.3
2163 Male, age 80, both hemispheres 6295.5
2793 Female, age 91, left hemisphere 5323.4
Lateral lemniscal nuclei
nTPM: 5454.3
2746 Female, age 85, left hemisphere 6035.9
2169 Male, age 76, both hemispheres 5769.6
2036 Male, age 80, both hemispheres 5272.7
2453 Male, age 74, right hemisphere 5106.1
2320 Female, age 91, left hemisphere 5087.2
Lateral medullary reticular nucleus
nTPM: 7380.5
2305 Male, age 74, both hemispheres 9240.5
2852 Male, age 80, both hemispheres 7359.1
2374 Male, age 61, both hemispheres 7152.5
2190 Female, age 85, both hemispheres 7045.2
2804 Female, age 91, both hemispheres 6763.7
2044 Male, age 76, both hemispheres 6722.2
Lateral parabrachial nucleus
nTPM: 6637.3
2792 Male, age 76, both hemispheres 7246.6
2139 Female, age 85, right hemisphere 6903.0
2790 Male, age 61, both hemispheres 6224.3
2013 Male, age 80, both hemispheres 6175.3
Lateral vestibular nucleus
nTPM: 6372.3
2311 Male, age 80, both hemispheres 6468.7
2184 Male, age 76, both hemispheres 6276.0
Locus coeruleus
nTPM: 6344.9
2123 Female, age 91, both hemispheres 6810.6
2788 Male, age 74, unknown 6708.5
2014 Male, age 55, unknown 6466.2
1980 Male, age 76, both hemispheres 6442.3
2317 Female, age 72, unknown 6338.0
2162 Male, age 80, both hemispheres 5971.5
2720 Male, age 74, both hemispheres 5676.8
Medial olivary nucleus
nTPM: 7858.4
1962 Male, age 76, both hemispheres 8100.2
2138 Female, age 91, both hemispheres 8015.0
1943 Male, age 61, both hemispheres 7991.4
2851 Male, age 80, both hemispheres 7327.0
Medial parabrachial nucleus
nTPM: 6163.3
2156 Male, age 61, both hemispheres 6516.3
2854 Male, age 80, both hemispheres 6172.2
2786 Male, age 76, both hemispheres 6079.3
2463 Female, age 85, right hemisphere 6025.4
2170 Female, age 91, both hemispheres 6023.4
Medial periolivary nuclei
nTPM: 6147.8
2791 Male, age 74, right hemisphere 7507.8
2063 Male, age 76, both hemispheres 6129.7
2171 Female, age 85, both hemispheres 5956.8
2081 Male, age 80, both hemispheres 5678.2
2458 Female, age 91, both hemispheres 5466.2
Medial vestibular nucleus
nTPM: 6481.4
2134 Male, age 76, both hemispheres 6848.0
2743 Female, age 85, both hemispheres 6827.5
2801 Male, age 74, both hemispheres 6615.5
2624 Male, age 61, both hemispheres 6477.1
2093 Male, age 80, both hemispheres 6201.7
2803 Female, age 91, both hemispheres 5918.6
Motor facial nucleus
nTPM: 5913.8
2365 Male, age 74, right hemisphere 6668.4
2062 Male, age 76, both hemispheres 6190.3
2795 Female, age 91, both hemispheres 5922.8
2126 Male, age 61, both hemispheres 5871.0
2697 Female, age 85, both hemispheres 5648.5
2327 Male, age 80, both hemispheres 5182.0
Motor hypoglossal nucleus
nTPM: 6449.1
2277 Male, age 76, both hemispheres 7292.0
2461 Male, age 61, both hemispheres 7236.8
2125 Female, age 91, both hemispheres 6132.3
2182 Male, age 80, both hemispheres 5883.4
2132 Female, age 85, both hemispheres 5701.2
Motor trigeminal nucleus
nTPM: 5651.2
2335 Male, age 61, both hemispheres 6244.0
2309 Male, age 76, both hemispheres 6022.8
2079 Male, age 80, both hemispheres 5597.0
2321 Female, age 91, both hemispheres 5359.9
2560 Male, age 74, both hemispheres 5032.3
Nuclei of the trapezoid body
nTPM: 5779.5
1983 Male, age 76, both hemispheres 6387.6
2735 Female, age 85, both hemispheres 5834.4
2368 Female, age 91, both hemispheres 5646.6
2166 Male, age 80, both hemispheres 5544.7
2159 Male, age 61, both hemispheres 5484.4
Nucleus ambiguus
nTPM: 7124.7
2071 Male, age 76, both hemispheres 8367.6
2096 Female, age 85, both hemispheres 5881.7
Nucleus cuneatus
nTPM: 6780.4
2564 Male, age 74, both hemispheres 7712.6
2808 Female, age 85, both hemispheres 7270.6
2562 Male, age 61, both hemispheres 7038.9
2380 Male, age 80, both hemispheres 6864.5
2100 Male, age 76, both hemispheres 6430.5
2805 Female, age 91, both hemispheres 5365.6
Nucleus gracilis
nTPM: 7627.9
2627 Male, age 74, both hemispheres 10498.8
2299 Female, age 85, both hemispheres 6357.0
2382 Male, age 80, both hemispheres 6027.8
Nucleus raphe magnus
nTPM: 5909.6
2051 Male, age 76, both hemispheres 6716.7
2455 Male, age 74, both hemispheres 6639.7
2172 Female, age 85, both hemispheres 5642.5
2328 Male, age 80, both hemispheres 5558.2
2160 Male, age 61, both hemispheres 5525.4
2459 Female, age 91, both hemispheres 5374.9
Nucleus raphe obscurus
nTPM: 7243.5
2142 Male, age 76, midline 9160.8
2800 Male, age 61, midline 6338.3
2845 Female, age 85, midline 6231.6
Nucleus raphe pallidus
nTPM: 8452.0
1924 Male, age 61, midline 11075.2
2145 Male, age 76, midline 7788.1
2183 Male, age 80, midline 6492.6
Nucleus tractus solitarii
nTPM: 6832.9
2144 Female, age 91, right hemisphere 7400.7
2191 Female, age 85, both hemispheres 7209.8
2307 Male, age 80, both hemispheres 6471.8
2656 Male, age 76, both hemispheres 6249.1
Paramedian reticular nucleus
nTPM: 6250.2
2052 Male, age 76, both hemispheres 6697.0
2057 Male, age 80, both hemispheres 6496.5
2050 Female, age 85, both hemispheres 5943.9
2313 Male, age 61, both hemispheres 5863.5
Parvicellular reticular nuclei
nTPM: 6078.1
2119 Male, age 80, both hemispheres 6876.0
2095 Male, age 76, both hemispheres 6361.4
2558 Male, age 74, both hemispheres 4997.0
Parvicellular reticular nuclei, medullary
nTPM: 6095.8
2091 Female, age 85, both hemispheres 6250.6
2189 Female, age 91, both hemispheres 6113.3
2181 Male, age 80, left hemisphere 5923.7
Peritrigeminal nucleus
nTPM: 7370.6
2067 Female, age 85, both hemispheres 7857.2
2136 Male, age 76, both hemispheres 7439.7
2179 Male, age 61, both hemispheres 6815.0
Pontine nuclei
nTPM: 5589.9
1863 Male, age 55, unknown 6147.4
1968 Male, age 76, left hemisphere 5954.9
2787 Female, age 85, both hemispheres 5861.4
2115 Male, age 80, left hemisphere 5784.8
2109 Female, age 72, unknown 5491.0
2727 Male, age 61, right hemisphere 5353.3
2319 Female, age 91, both hemispheres 5241.6
2454 Male, age 74, left hemisphere 4884.7
Pontine raphe nucleus
nTPM: 6039.5
2853 Male, age 76, midline 6320.8
2122 Female, age 85, midline 5758.2
Posteroventral cochlear nucleus
nTPM: 6092.0
2371 Male, age 61, both hemispheres 6490.7
2070 Male, age 76, both hemispheres 6449.2
2752 Female, age 85, both hemispheres 6139.2
2341 Male, age 80, both hemispheres 5864.6
2135 Female, age 91, both hemispheres 5516.4
Prepositus hypoglossal nucleus
nTPM: 6520.8
2086 Male, age 80, both hemispheres 6798.9
2855 Female, age 85, right hemisphere 6242.7
Principal sensory trigeminal nucleus
nTPM: 5690.8
2324 Male, age 76, both hemispheres 6547.3
2008 Male, age 80, left hemisphere 5564.0
2158 Male, age 61, both hemispheres 5495.8
2367 Female, age 91, left hemisphere 5156.2
Reticular pontine nucleus, caudal
nTPM: 5573.2
2092 Male, age 76, both hemispheres 6573.9
2457 Female, age 91, both hemispheres 5377.4
2332 Male, age 80, right hemisphere 5367.6
2559 Male, age 74, both hemispheres 4974.0
Reticular pontine nucleus, oral
nTPM: 5781.5
1939 Male, age 80, both hemispheres 6667.8
2167 Male, age 76, both hemispheres 6122.0
2012 Female, age 85, both hemispheres 5972.6
2366 Female, age 91, both hemispheres 5224.3
2361 Male, age 74, both hemispheres 4921.0
Reticulotegmental nucleus
nTPM: 5750.1
2333 Male, age 80, both hemispheres 6046.3
2322 Female, age 91, both hemispheres 5914.4
2325 Male, age 76, both hemispheres 5891.7
2452 Male, age 74, both hemispheres 5148.1
Spinal trigeminal nucleus, caudal
nTPM: 6331.9
2308 Male, age 80, both hemispheres 6640.0
2642 Male, age 74, both hemispheres 6478.2
2312 Male, age 61, both hemispheres 6438.3
2447 Male, age 76, both hemispheres 6168.9
2390 Female, age 91, both hemispheres 5934.1
Spinal trigeminal nucleus, interpolar
nTPM: 6267.1
2625 Male, age 61, both hemispheres 6956.5
2066 Male, age 76, right hemisphere 6609.6
2033 Male, age 80, both hemispheres 6156.5
2386 Female, age 85, both hemispheres 6006.1
2389 Female, age 91, both hemispheres 5606.8
Spinal trigeminal nucleus, oral
nTPM: 6050.8
2737 Female, age 85, both hemispheres 6173.4
1978 Male, age 76, both hemispheres 6166.5
2164 Male, age 80, both hemispheres 5812.6
Spinal vestibular nucleus
nTPM: 6034.2
2748 Male, age 76, both hemispheres 6353.8
2780 Male, age 80, both hemispheres 6256.7
2796 Male, age 61, both hemispheres 6231.8
2806 Female, age 85, both hemispheres 6163.3
2186 Female, age 91, both hemispheres 5940.5
2384 Male, age 74, both hemispheres 5258.9
Subcoeruleus area
nTPM: 5874.0
1958 Male, age 80, both hemispheres 6206.8
2369 Female, age 85, left hemisphere 6092.1
2323 Female, age 91, left hemisphere 6018.0
2089 Male, age 76, left hemisphere 5647.7
2451 Male, age 74, both hemispheres 5405.3
Superior olive
nTPM: 5961.8
2364 Male, age 74, right hemisphere 7452.0
2020 Male, age 76, both hemispheres 5931.6
1875 Female, age 85, both hemispheres 5681.1
2329 Male, age 80, right hemisphere 5382.3
2561 Female, age 91, both hemispheres 5361.7
Superior vestibular nucleus
nTPM: 8001.8
2383 Male, age 74, both hemispheres 9776.3
2061 Male, age 76, both hemispheres 7583.3
2015 Male, age 80, both hemispheres 6645.6
Ventral medullary reticular nucleus
nTPM: 6252.9
2060 Male, age 76, both hemispheres 6391.9
2372 Male, age 61, both hemispheres 6113.9
Ventral periolivary nuclei
nTPM: 5832.6
2130 Female, age 85, both hemispheres 6145.0
2023 Male, age 76, both hemispheres 6009.6
2165 Male, age 80, both hemispheres 5962.6
2794 Female, age 91, left hemisphere 5213.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 6683.2
1986 Male, age 76, both hemispheres 7547.3
2741 Female, age 85, both hemispheres 6599.7
2302 Female, age 91, both hemispheres 6587.7
2180 Male, age 61, both hemispheres 6545.7
2118 Male, age 80, both hemispheres 6135.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 5958.6
2359 Male, age 61, both hemispheres 6521.4
2840 Female, age 85, both hemispheres 6359.8
1959 Male, age 76, both hemispheres 6266.7
2449 Male, age 74, both hemispheres 5651.8
2161 Male, age 80, both hemispheres 5588.9
2456 Female, age 91, both hemispheres 5363.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 7264.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 5711.0
FF:10182-103D2 60 years, female 6702.1
FF:10165-103B3 76 years, female 4719.9
Medulla oblongata
Scaled Tags Per Million: 7264.0
FF:10174-103C3 60 years, female 8093.0
FF:10038-101F2 18-64 years, mixed 7160.5
FF:10155-103A2 76 years, female 6538.6
Pons
Scaled Tags Per Million: 2753.0
FF:10033-101E6 18-54 years, mixed 2753.0

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 2416.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 2416.1
Samples: 4

Max nTPM: 2651.6
Min nTPM: 2073.4
Sample A Female 2073.4
Sample B Female 2378.0
Sample C Male 2651.6
Sample D Male 2561.3
Pons
nTPM: 2300.8
Samples: 4

Max nTPM: 2816.4
Min nTPM: 1808.3
Sample A Female 2816.4
Sample B Female 1808.3
Sample C Male 2251.3
Sample D Male 2327.3

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 763.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 763.5
Samples: 4

Max nTPM: 813.6
Min nTPM: 740.8
Sample A Male 750.0
Sample B Male 740.8
Sample C Female 813.6
Sample D Female 749.4

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 13.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 13.0
77800883 Antisense, RP_070212_01_A02, Mouse strain C57BL/6J (56 days, male) 19.4
79490114 Antisense, RP_070212_01_A02, Mouse strain C57BL/6J (56 days, male) 15.8
276 Antisense, RP_Baylor_102693, Mouse strain C57BL/6J (56 days, male) 6.7
275 Antisense, RP_Baylor_102693, Mouse strain C57BL/6J (56 days, male) 3.3
Pons
Expression energy: 11.1
77800883 Antisense, RP_070212_01_A02, Mouse strain C57BL/6J (56 days, male) 16.8
79490114 Antisense, RP_070212_01_A02, Mouse strain C57BL/6J (56 days, male) 14.5
276 Antisense, RP_Baylor_102693, Mouse strain C57BL/6J (56 days, male) 5.4
275 Antisense, RP_Baylor_102693, Mouse strain C57BL/6J (56 days, male) 2.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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