HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
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Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1108.8 nTPM
HPA:1108.8 nTPM
GTEx:980.8 nTPM
FANTOM5:2282.5 Scaled Tags Per Million
Pig:1521.9 nTPM
Mouse:1090.0 nTPM
Allen mouse:25.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039247Antibody HPA043684Antibody HPA063394Antibody CAB011513
Glial cells MediumNot detectedNot detectedNot detected
Neuronal cells HighHighMediumMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1108.8
Sample id Sample description nTPM
Hippocampus
nTPM: 870.4
1898 Male, age 80, left hemisphere 1049.3
2621 Female, age 67, right hemisphere 919.5
2148 Female, age 91, left hemisphere 886.9
2529 Female, age 94, left hemisphere 811.4
1855 Male, age 76, left hemisphere 795.4
1911 Female, age 85, right hemisphere 759.9
Dentate gyrus
nTPM: 924.1
2530 Female, age 94, left hemisphere 1201.2
1927 Female, age 91, both hemispheres 948.2
2246 Female, age 85, both hemispheres 888.2
2528 Male, age 74, both hemispheres 849.1
2010 Male, age 76, both hemispheres 841.9
2531 Female, age 67, both hemispheres 815.7
Entorhinal gyrus
nTPM: 1032.1
2764 Male, age 80, right hemisphere 1144.2
2613 Female, age 94, left hemisphere 1140.5
1938 Female, age 85, left hemisphere 1080.8
2686 Male, age 75, right hemisphere 1019.4
1787 Male, age 76, left hemisphere 985.8
2117 Female, age 91, right hemisphere 821.7
Hippocampus, CA1
nTPM: 876.6
2749 Male, age 80, left hemisphere 1049.7
1873 Female, age 85, both hemispheres 931.0
2527 Male, age 74, both hemispheres 902.7
2045 Male, age 76, both hemispheres 764.4
2082 Female, age 91, right hemisphere 735.3
Hippocampus, CA2
nTPM: 898.0
1963 Male, age 80, left hemisphere 1087.1
2437 Female, age 94, left hemisphere 983.4
1892 Male, age 76, both hemispheres 937.5
2249 Male, age 74, both hemispheres 827.6
1940 Female, age 85, left hemisphere 797.4
2113 Female, age 91, right hemisphere 755.0
Hippocampus, CA3
nTPM: 853.9
2861 Female, age 67, both hemispheres 895.5
1891 Female, age 85, both hemispheres 868.4
2137 Male, age 80, left hemisphere 864.0
2436 Male, age 74, both hemispheres 857.2
1867 Male, age 76, both hemispheres 831.6
2620 Female, age 94, left hemisphere 806.7
Parahippocampal cortex
nTPM: 1003.4
1850 Male, age 80, both hemispheres 1134.2
2532 Female, age 72, left hemisphere 1081.8
1933 Female, age 85, both hemispheres 1042.7
2692 Male, age 74, both hemispheres 1007.5
2622 Female, age 67, right hemisphere 997.1
2693 Female, age 94, both hemispheres 994.5
2245 Female, age 91, both hemispheres 993.3
2250 Female, age 67, right hemisphere 967.5
1990 Female, age 91, right hemisphere 963.2
2018 Male, age 76, both hemispheres 852.5
Perirhinal gyrus
nTPM: 1108.8
1847 Female, age 91, left hemisphere 1165.1
1841 Female, age 85, right hemisphere 1133.2
1794 Male, age 80, right hemisphere 1123.3
2848 Male, age 76, right hemisphere 1086.9
2521 Female, age 94, right hemisphere 1035.2
Subiculum
nTPM: 890.6
1977 Female, age 85, both hemispheres 1037.4
2619 Male, age 74, both hemispheres 924.9
2438 Female, age 94, left hemisphere 922.2
1901 Male, age 80, both hemispheres 901.7
2042 Male, age 76, both hemispheres 796.2
2729 Female, age 91, right hemisphere 761.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 980.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 980.8
Samples: 197

Max nTPM: 2753.4
Min nTPM: 255.3
Std nTPM: 520.0
Median nTPM: 822.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2753.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 2664.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 2295.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 2187.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 2163.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 2125.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 2123.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 2072.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 2050.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 1993.5
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 1978.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 2282.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 2282.5
FF:10169-103B7 60 years, female 3401.7
FF:10153-102I9 76 years, female 1163.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1521.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1522.0
Samples: 4

Max nTPM: 1827.2
Min nTPM: 1027.4
Sample A Female 1827.2
Sample B Female 1621.8
Sample C Male 1611.4
Sample D Male 1027.4
Entorhinal cortex
nTPM: 1422.2
Samples: 4

Max nTPM: 1617.1
Min nTPM: 1141.9
Sample A Female 1507.4
Sample B Female 1422.2
Sample C Male 1617.1
Sample D Male 1141.9
Subiculum
nTPM: 1427.6
Samples: 4

Max nTPM: 1587.1
Min nTPM: 1218.3
Sample A Female 1587.1
Sample B Female 1432.9
Sample C Male 1472.1
Sample D Male 1218.3
Ventral hippocampus
nTPM: 1369.2
Samples: 4

Max nTPM: 1898.6
Min nTPM: 1008.2
Sample A Female 1289.6
Sample B Female 1008.2
Sample C Male 1898.6
Sample D Male 1280.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1090.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1090.0
Samples: 4

Max nTPM: 1236.2
Min nTPM: 1013.6
Sample A Male 1013.6
Sample B Male 1044.1
Sample C Female 1066.2
Sample D Female 1236.2
Hippocampal formation
nTPM: 1004.9
Samples: 4

Max nTPM: 1064.6
Min nTPM: 937.7
Sample A Male 1064.6
Sample B Male 937.7
Sample C Female 993.0
Sample D Female 1024.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.7
77465048 Antisense, RP_070129_03_A07, Mouse strain C57BL/6J (56 days, male) 25.7

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The Human Protein Atlas

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