PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:663.4 nTPM
HPA:663.4 nTPM
FANTOM5:1508.5 Scaled Tags Per Million
Pig:1038.5 nTPM
Mouse:2302.9 nTPM
Allen mouse:19.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 663.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 543.2
2301 Female, age 85, both hemispheres 569.2
1984 Male, age 76, both hemispheres 550.7
2188 Female, age 91, both hemispheres 534.9
2090 Male, age 80, both hemispheres 518.1
Area postrema
nTPM: 655.7
2054 Male, age 76, both hemispheres 701.5
2799 Male, age 61, both hemispheres 634.5
2306 Male, age 80, both hemispheres 631.2
Cuneate nuclei
nTPM: 553.0
2131 Male, age 76, both hemispheres 587.1
2381 Male, age 80, both hemispheres 558.3
2376 Male, age 61, both hemispheres 513.6
Dorsal cochlear nucleus
nTPM: 550.6
2802 Male, age 74, right hemisphere 581.7
2058 Male, age 76, both hemispheres 568.3
2187 Female, age 91, both hemispheres 553.4
2370 Male, age 61, both hemispheres 528.4
2378 Male, age 80, both hemispheres 521.5
Dorsal medullary reticular nucleus
nTPM: 546.1
2088 Male, age 76, both hemispheres 558.8
2040 Female, age 85, both hemispheres 541.5
2373 Male, age 61, both hemispheres 537.8
Dorsal motor vagal complex
nTPM: 618.9
2813 Female, age 72, unknown 792.0
2000 Male, age 74, unknown 653.4
2797 Male, age 61, both hemispheres 639.0
2844 Male, age 55, unknown 616.8
2185 Male, age 76, both hemispheres 607.1
2643 Male, age 74, both hemispheres 574.2
2133 Female, age 91, both hemispheres 564.4
2807 Female, age 85, both hemispheres 504.5
Dorsal tegmental nucleus
nTPM: 619.2
1936 Male, age 76, left hemisphere 660.3
2083 Male, age 80, both hemispheres 650.3
2326 Male, age 74, both hemispheres 589.6
2358 Male, age 61, both hemispheres 576.6
Dorsolateral tegmental area
nTPM: 601.8
2654 Male, age 80, both hemispheres 643.6
2141 Male, age 76, both hemispheres 617.1
2360 Male, age 74, both hemispheres 598.7
2751 Female, age 85, both hemispheres 596.3
2337 Male, age 61, both hemispheres 553.5
Gigantocellular reticular nuclei, medullary
nTPM: 556.4
1876 Female, age 85, both hemispheres 589.4
2314 Male, age 61, both hemispheres 575.8
2462 Male, age 74, both hemispheres 568.3
2022 Male, age 76, right hemisphere 557.6
2387 Female, age 91, both hemispheres 533.3
2310 Male, age 80, both hemispheres 513.9
Gigantocellular reticular nuclei, pars
nTPM: 556.1
2084 Female, age 85, both hemispheres 576.9
2168 Male, age 76, both hemispheres 569.5
2330 Male, age 80, both hemispheres 552.0
2706 Male, age 80, both hemispheres 548.6
2336 Male, age 61, both hemispheres 533.4
Inferior olive
nTPM: 624.5
2563 Male, age 74, both hemispheres 678.6
2085 Female, age 85, both hemispheres 645.4
2628 Female, age 91, both hemispheres 631.7
2379 Male, age 80, both hemispheres 604.7
2178 Male, age 61, both hemispheres 562.3
Kolliker-Fuse nucleus
nTPM: 640.0
2315 Male, age 76, right hemisphere 805.5
2163 Male, age 80, both hemispheres 608.3
2793 Female, age 91, left hemisphere 506.1
Lateral lemniscal nuclei
nTPM: 529.7
2169 Male, age 76, both hemispheres 599.2
2036 Male, age 80, both hemispheres 540.2
2746 Female, age 85, left hemisphere 514.8
2453 Male, age 74, right hemisphere 509.8
2320 Female, age 91, left hemisphere 484.6
Lateral medullary reticular nucleus
nTPM: 603.5
2044 Male, age 76, both hemispheres 648.5
2374 Male, age 61, both hemispheres 631.2
2804 Female, age 91, both hemispheres 617.1
2190 Female, age 85, both hemispheres 585.8
2852 Male, age 80, both hemispheres 569.9
2305 Male, age 74, both hemispheres 568.6
Lateral parabrachial nucleus
nTPM: 590.3
2792 Male, age 76, both hemispheres 662.0
2139 Female, age 85, right hemisphere 629.9
2013 Male, age 80, both hemispheres 568.0
2790 Male, age 61, both hemispheres 501.3
Lateral vestibular nucleus
nTPM: 611.7
2184 Male, age 76, both hemispheres 629.2
2311 Male, age 80, both hemispheres 594.1
Locus coeruleus
nTPM: 599.0
2788 Male, age 74, unknown 721.5
2317 Female, age 72, unknown 611.0
1980 Male, age 76, both hemispheres 588.7
2123 Female, age 91, both hemispheres 588.4
2720 Male, age 74, both hemispheres 572.8
2014 Male, age 55, unknown 563.6
2162 Male, age 80, both hemispheres 546.9
Medial olivary nucleus
nTPM: 636.0
2138 Female, age 91, both hemispheres 660.3
2851 Male, age 80, both hemispheres 659.6
1962 Male, age 76, both hemispheres 626.5
1943 Male, age 61, both hemispheres 597.5
Medial parabrachial nucleus
nTPM: 594.1
2854 Male, age 80, both hemispheres 654.3
2786 Male, age 76, both hemispheres 634.5
2170 Female, age 91, both hemispheres 576.8
2156 Male, age 61, both hemispheres 564.6
2463 Female, age 85, right hemisphere 540.2
Medial periolivary nuclei
nTPM: 551.8
2063 Male, age 76, both hemispheres 604.7
2791 Male, age 74, right hemisphere 593.8
2171 Female, age 85, both hemispheres 569.7
2458 Female, age 91, both hemispheres 497.3
2081 Male, age 80, both hemispheres 493.4
Medial vestibular nucleus
nTPM: 607.4
2624 Male, age 61, both hemispheres 637.7
2801 Male, age 74, both hemispheres 623.2
2134 Male, age 76, both hemispheres 622.8
2093 Male, age 80, both hemispheres 594.8
2743 Female, age 85, both hemispheres 584.7
2803 Female, age 91, both hemispheres 581.0
Motor facial nucleus
nTPM: 558.0
2062 Male, age 76, both hemispheres 609.7
2795 Female, age 91, both hemispheres 600.2
2365 Male, age 74, right hemisphere 559.4
2697 Female, age 85, both hemispheres 540.2
2126 Male, age 61, both hemispheres 521.7
2327 Male, age 80, both hemispheres 516.9
Motor hypoglossal nucleus
nTPM: 587.2
2461 Male, age 61, both hemispheres 720.4
2277 Male, age 76, both hemispheres 669.8
2125 Female, age 91, both hemispheres 555.6
2182 Male, age 80, both hemispheres 502.2
2132 Female, age 85, both hemispheres 488.1
Motor trigeminal nucleus
nTPM: 535.5
2309 Male, age 76, both hemispheres 610.5
2335 Male, age 61, both hemispheres 559.1
2079 Male, age 80, both hemispheres 528.9
2560 Male, age 74, both hemispheres 493.0
2321 Female, age 91, both hemispheres 486.1
Nuclei of the trapezoid body
nTPM: 570.9
2159 Male, age 61, both hemispheres 634.5
1983 Male, age 76, both hemispheres 608.6
2735 Female, age 85, both hemispheres 548.2
2166 Male, age 80, both hemispheres 533.4
2368 Female, age 91, both hemispheres 529.7
Nucleus ambiguus
nTPM: 562.4
2071 Male, age 76, both hemispheres 671.1
2096 Female, age 85, both hemispheres 453.8
Nucleus cuneatus
nTPM: 548.3
2564 Male, age 74, both hemispheres 585.1
2380 Male, age 80, both hemispheres 578.0
2100 Male, age 76, both hemispheres 544.2
2562 Male, age 61, both hemispheres 535.0
2808 Female, age 85, both hemispheres 534.8
2805 Female, age 91, both hemispheres 512.9
Nucleus gracilis
nTPM: 572.6
2627 Male, age 74, both hemispheres 700.6
2299 Female, age 85, both hemispheres 511.1
2382 Male, age 80, both hemispheres 506.0
Nucleus raphe magnus
nTPM: 565.1
2455 Male, age 74, both hemispheres 607.0
2160 Male, age 61, both hemispheres 602.8
2051 Male, age 76, both hemispheres 575.1
2328 Male, age 80, both hemispheres 563.8
2172 Female, age 85, both hemispheres 537.2
2459 Female, age 91, both hemispheres 504.8
Nucleus raphe obscurus
nTPM: 575.0
2142 Male, age 76, midline 635.6
2845 Female, age 85, midline 551.5
2800 Male, age 61, midline 538.0
Nucleus raphe pallidus
nTPM: 607.5
2145 Male, age 76, midline 632.2
1924 Male, age 61, midline 601.7
2183 Male, age 80, midline 588.6
Nucleus tractus solitarii
nTPM: 578.4
2144 Female, age 91, right hemisphere 683.9
2656 Male, age 76, both hemispheres 616.0
2191 Female, age 85, both hemispheres 529.1
2307 Male, age 80, both hemispheres 484.7
Paramedian reticular nucleus
nTPM: 580.5
2052 Male, age 76, both hemispheres 643.2
2050 Female, age 85, both hemispheres 587.2
2057 Male, age 80, both hemispheres 565.9
2313 Male, age 61, both hemispheres 525.6
Parvicellular reticular nuclei
nTPM: 569.7
2119 Male, age 80, both hemispheres 616.9
2095 Male, age 76, both hemispheres 606.7
2558 Male, age 74, both hemispheres 485.5
Parvicellular reticular nuclei, medullary
nTPM: 555.2
2189 Female, age 91, both hemispheres 565.2
2091 Female, age 85, both hemispheres 558.9
2181 Male, age 80, left hemisphere 541.5
Peritrigeminal nucleus
nTPM: 649.3
2136 Male, age 76, both hemispheres 672.7
2067 Female, age 85, both hemispheres 661.7
2179 Male, age 61, both hemispheres 613.4
Pontine nuclei
nTPM: 553.9
1863 Male, age 55, unknown 707.9
2109 Female, age 72, unknown 583.0
2727 Male, age 61, right hemisphere 564.0
1968 Male, age 76, left hemisphere 548.1
2787 Female, age 85, both hemispheres 528.1
2319 Female, age 91, both hemispheres 505.9
2454 Male, age 74, left hemisphere 498.4
2115 Male, age 80, left hemisphere 495.5
Pontine raphe nucleus
nTPM: 608.3
2853 Male, age 76, midline 646.8
2122 Female, age 85, midline 569.8
Posteroventral cochlear nucleus
nTPM: 568.7
2070 Male, age 76, both hemispheres 633.4
2752 Female, age 85, both hemispheres 579.3
2341 Male, age 80, both hemispheres 571.4
2371 Male, age 61, both hemispheres 549.7
2135 Female, age 91, both hemispheres 509.6
Prepositus hypoglossal nucleus
nTPM: 577.2
2855 Female, age 85, right hemisphere 598.2
2086 Male, age 80, both hemispheres 556.1
Principal sensory trigeminal nucleus
nTPM: 571.9
2324 Male, age 76, both hemispheres 673.4
2158 Male, age 61, both hemispheres 586.5
2008 Male, age 80, left hemisphere 544.5
2367 Female, age 91, left hemisphere 483.3
Reticular pontine nucleus, caudal
nTPM: 536.9
2092 Male, age 76, both hemispheres 609.3
2332 Male, age 80, right hemisphere 534.1
2559 Male, age 74, both hemispheres 504.4
2457 Female, age 91, both hemispheres 500.0
Reticular pontine nucleus, oral
nTPM: 574.1
1939 Male, age 80, both hemispheres 665.6
2167 Male, age 76, both hemispheres 624.7
2012 Female, age 85, both hemispheres 576.2
2366 Female, age 91, both hemispheres 528.4
2361 Male, age 74, both hemispheres 475.7
Reticulotegmental nucleus
nTPM: 577.6
2325 Male, age 76, both hemispheres 614.1
2333 Male, age 80, both hemispheres 602.8
2322 Female, age 91, both hemispheres 565.4
2452 Male, age 74, both hemispheres 528.2
Spinal trigeminal nucleus, caudal
nTPM: 558.3
2447 Male, age 76, both hemispheres 571.8
2642 Male, age 74, both hemispheres 562.4
2308 Male, age 80, both hemispheres 556.9
2390 Female, age 91, both hemispheres 552.2
2312 Male, age 61, both hemispheres 548.2
Spinal trigeminal nucleus, interpolar
nTPM: 603.8
2625 Male, age 61, both hemispheres 695.1
2066 Male, age 76, right hemisphere 657.5
2389 Female, age 91, both hemispheres 565.0
2033 Male, age 80, both hemispheres 551.1
2386 Female, age 85, both hemispheres 550.1
Spinal trigeminal nucleus, oral
nTPM: 566.5
1978 Male, age 76, both hemispheres 587.3
2737 Female, age 85, both hemispheres 562.1
2164 Male, age 80, both hemispheres 550.0
Spinal vestibular nucleus
nTPM: 560.4
2748 Male, age 76, both hemispheres 598.1
2806 Female, age 85, both hemispheres 590.4
2186 Female, age 91, both hemispheres 558.7
2780 Male, age 80, both hemispheres 553.9
2796 Male, age 61, both hemispheres 535.5
2384 Male, age 74, both hemispheres 525.6
Subcoeruleus area
nTPM: 594.5
1958 Male, age 80, both hemispheres 647.9
2323 Female, age 91, left hemisphere 613.9
2369 Female, age 85, left hemisphere 599.9
2451 Male, age 74, both hemispheres 566.0
2089 Male, age 76, left hemisphere 544.9
Superior olive
nTPM: 545.8
2364 Male, age 74, right hemisphere 571.5
2020 Male, age 76, both hemispheres 565.0
1875 Female, age 85, both hemispheres 545.9
2329 Male, age 80, right hemisphere 540.3
2561 Female, age 91, both hemispheres 506.3
Superior vestibular nucleus
nTPM: 663.4
2383 Male, age 74, both hemispheres 735.5
2061 Male, age 76, both hemispheres 642.1
2015 Male, age 80, both hemispheres 612.5
Ventral medullary reticular nucleus
nTPM: 561.4
2060 Male, age 76, both hemispheres 563.8
2372 Male, age 61, both hemispheres 559.0
Ventral periolivary nuclei
nTPM: 564.8
2165 Male, age 80, both hemispheres 592.2
2130 Female, age 85, both hemispheres 586.0
2023 Male, age 76, both hemispheres 581.9
2794 Female, age 91, left hemisphere 499.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 588.1
1986 Male, age 76, both hemispheres 669.9
2741 Female, age 85, both hemispheres 610.6
2302 Female, age 91, both hemispheres 575.3
2180 Male, age 61, both hemispheres 558.9
2118 Male, age 80, both hemispheres 525.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 559.2
2840 Female, age 85, both hemispheres 616.6
2359 Male, age 61, both hemispheres 589.7
1959 Male, age 76, both hemispheres 584.2
2161 Male, age 80, both hemispheres 540.0
2449 Male, age 74, both hemispheres 533.5
2456 Female, age 91, both hemispheres 491.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 1508.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1293.8
FF:10165-103B3 76 years, female 1375.5
FF:10182-103D2 60 years, female 1212.2
Medulla oblongata
Scaled Tags Per Million: 941.3
FF:10155-103A2 76 years, female 1234.7
FF:10174-103C3 60 years, female 1007.7
FF:10038-101F2 18-64 years, mixed 581.6
Pons
Scaled Tags Per Million: 1508.5
FF:10033-101E6 18-54 years, mixed 1508.5

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 1038.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 1038.6
Samples: 4

Max nTPM: 1233.9
Min nTPM: 924.9
Sample A Female 971.0
Sample B Female 1233.9
Sample C Male 1024.4
Sample D Male 924.9
Pons
nTPM: 988.9
Samples: 4

Max nTPM: 1035.9
Min nTPM: 946.3
Sample A Female 1018.1
Sample B Female 955.2
Sample C Male 946.3
Sample D Male 1035.9

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 2302.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 2302.9
Samples: 4

Max nTPM: 2360.3
Min nTPM: 2249.4
Sample A Male 2249.4
Sample B Male 2344.3
Sample C Female 2257.7
Sample D Female 2360.3

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 19.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 19.7
74750016 Antisense, RP_060220_05_E06, Mouse strain C57BL/6J (56 days, male) 21.6
70429447 Antisense, RP_050614_01_F10, Mouse strain C57BL/6J (56 days, male) 17.7
Pons
Expression energy: 17.8
74750016 Antisense, RP_060220_05_E06, Mouse strain C57BL/6J (56 days, male) 19.7
70429447 Antisense, RP_050614_01_F10, Mouse strain C57BL/6J (56 days, male) 15.9

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