PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:631.5 nTPM
HPA:631.5 nTPM
FANTOM5:583.5 Scaled Tags Per Million
Pig:1049.7 nTPM
Mouse:70.1 nTPM
Allen mouse:2.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 631.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 522.2
2301 Female, age 85, both hemispheres 678.4
2188 Female, age 91, both hemispheres 581.6
2090 Male, age 80, both hemispheres 469.5
1984 Male, age 76, both hemispheres 359.3
Area postrema
nTPM: 406.2
2306 Male, age 80, both hemispheres 468.2
2799 Male, age 61, both hemispheres 421.1
2054 Male, age 76, both hemispheres 329.4
Cuneate nuclei
nTPM: 478.3
2381 Male, age 80, both hemispheres 540.3
2376 Male, age 61, both hemispheres 495.2
2131 Male, age 76, both hemispheres 399.5
Dorsal cochlear nucleus
nTPM: 428.2
2187 Female, age 91, both hemispheres 519.0
2802 Male, age 74, right hemisphere 428.6
2378 Male, age 80, both hemispheres 427.9
2370 Male, age 61, both hemispheres 398.6
2058 Male, age 76, both hemispheres 367.1
Dorsal medullary reticular nucleus
nTPM: 444.9
2373 Male, age 61, both hemispheres 477.1
2040 Female, age 85, both hemispheres 434.8
2088 Male, age 76, both hemispheres 422.7
Dorsal motor vagal complex
nTPM: 379.5
2797 Male, age 61, both hemispheres 452.7
2185 Male, age 76, both hemispheres 450.9
2000 Male, age 74, unknown 379.7
2844 Male, age 55, unknown 366.6
2813 Female, age 72, unknown 353.5
2807 Female, age 85, both hemispheres 349.0
2643 Male, age 74, both hemispheres 344.2
2133 Female, age 91, both hemispheres 339.2
Dorsal tegmental nucleus
nTPM: 409.8
2083 Male, age 80, both hemispheres 499.3
2326 Male, age 74, both hemispheres 421.7
1936 Male, age 76, left hemisphere 386.3
2358 Male, age 61, both hemispheres 331.9
Dorsolateral tegmental area
nTPM: 426.3
2751 Female, age 85, both hemispheres 569.2
2654 Male, age 80, both hemispheres 493.4
2337 Male, age 61, both hemispheres 411.8
2360 Male, age 74, both hemispheres 330.4
2141 Male, age 76, both hemispheres 326.6
Gigantocellular reticular nuclei, medullary
nTPM: 475.5
2314 Male, age 61, both hemispheres 689.4
2387 Female, age 91, both hemispheres 531.1
1876 Female, age 85, both hemispheres 492.0
2310 Male, age 80, both hemispheres 441.8
2022 Male, age 76, right hemisphere 373.5
2462 Male, age 74, both hemispheres 325.4
Gigantocellular reticular nuclei, pars
nTPM: 426.2
2336 Male, age 61, both hemispheres 460.6
2330 Male, age 80, both hemispheres 438.8
2706 Male, age 80, both hemispheres 430.4
2084 Female, age 85, both hemispheres 427.1
2168 Male, age 76, both hemispheres 374.3
Inferior olive
nTPM: 525.2
2178 Male, age 61, both hemispheres 569.3
2628 Female, age 91, both hemispheres 536.1
2085 Female, age 85, both hemispheres 529.7
2563 Male, age 74, both hemispheres 507.4
2379 Male, age 80, both hemispheres 483.5
Kolliker-Fuse nucleus
nTPM: 479.9
2793 Female, age 91, left hemisphere 620.7
2163 Male, age 80, both hemispheres 429.8
2315 Male, age 76, right hemisphere 389.3
Lateral lemniscal nuclei
nTPM: 424.4
2320 Female, age 91, left hemisphere 536.9
2746 Female, age 85, left hemisphere 418.5
2169 Male, age 76, both hemispheres 410.1
2036 Male, age 80, both hemispheres 388.2
2453 Male, age 74, right hemisphere 368.1
Lateral medullary reticular nucleus
nTPM: 528.4
2852 Male, age 80, both hemispheres 622.4
2305 Male, age 74, both hemispheres 578.3
2374 Male, age 61, both hemispheres 562.3
2190 Female, age 85, both hemispheres 501.6
2804 Female, age 91, both hemispheres 483.0
2044 Male, age 76, both hemispheres 423.0
Lateral parabrachial nucleus
nTPM: 454.8
2792 Male, age 76, both hemispheres 649.1
2013 Male, age 80, both hemispheres 438.6
2139 Female, age 85, right hemisphere 381.1
2790 Male, age 61, both hemispheres 350.4
Lateral vestibular nucleus
nTPM: 490.5
2311 Male, age 80, both hemispheres 543.5
2184 Male, age 76, both hemispheres 437.5
Locus coeruleus
nTPM: 323.6
2162 Male, age 80, both hemispheres 355.5
2720 Male, age 74, both hemispheres 354.6
2317 Female, age 72, unknown 348.4
2123 Female, age 91, both hemispheres 306.0
2788 Male, age 74, unknown 302.6
2014 Male, age 55, unknown 302.0
1980 Male, age 76, both hemispheres 296.1
Medial olivary nucleus
nTPM: 534.9
1943 Male, age 61, both hemispheres 590.3
1962 Male, age 76, both hemispheres 566.7
2851 Male, age 80, both hemispheres 527.5
2138 Female, age 91, both hemispheres 455.1
Medial parabrachial nucleus
nTPM: 483.4
2170 Female, age 91, both hemispheres 592.1
2463 Female, age 85, right hemisphere 530.6
2854 Male, age 80, both hemispheres 501.3
2786 Male, age 76, both hemispheres 434.6
2156 Male, age 61, both hemispheres 358.5
Medial periolivary nuclei
nTPM: 419.1
2458 Female, age 91, both hemispheres 469.2
2081 Male, age 80, both hemispheres 453.3
2791 Male, age 74, right hemisphere 452.1
2063 Male, age 76, both hemispheres 384.3
2171 Female, age 85, both hemispheres 336.3
Medial vestibular nucleus
nTPM: 450.4
2801 Male, age 74, both hemispheres 560.0
2803 Female, age 91, both hemispheres 504.1
2624 Male, age 61, both hemispheres 477.4
2093 Male, age 80, both hemispheres 452.5
2743 Female, age 85, both hemispheres 399.1
2134 Male, age 76, both hemispheres 309.3
Motor facial nucleus
nTPM: 442.0
2697 Female, age 85, both hemispheres 516.7
2126 Male, age 61, both hemispheres 493.6
2365 Male, age 74, right hemisphere 447.6
2795 Female, age 91, both hemispheres 447.6
2062 Male, age 76, both hemispheres 375.4
2327 Male, age 80, both hemispheres 371.0
Motor hypoglossal nucleus
nTPM: 433.4
2182 Male, age 80, both hemispheres 544.4
2125 Female, age 91, both hemispheres 484.5
2132 Female, age 85, both hemispheres 480.2
2461 Male, age 61, both hemispheres 361.5
2277 Male, age 76, both hemispheres 296.3
Motor trigeminal nucleus
nTPM: 422.4
2321 Female, age 91, both hemispheres 486.6
2560 Male, age 74, both hemispheres 439.7
2309 Male, age 76, both hemispheres 410.3
2335 Male, age 61, both hemispheres 391.4
2079 Male, age 80, both hemispheres 383.7
Nuclei of the trapezoid body
nTPM: 395.0
2166 Male, age 80, both hemispheres 461.5
2368 Female, age 91, both hemispheres 448.5
1983 Male, age 76, both hemispheres 380.4
2159 Male, age 61, both hemispheres 373.8
2735 Female, age 85, both hemispheres 310.7
Nucleus ambiguus
nTPM: 498.9
2071 Male, age 76, both hemispheres 569.3
2096 Female, age 85, both hemispheres 428.4
Nucleus cuneatus
nTPM: 486.6
2380 Male, age 80, both hemispheres 585.5
2808 Female, age 85, both hemispheres 574.8
2100 Male, age 76, both hemispheres 487.3
2564 Male, age 74, both hemispheres 443.7
2805 Female, age 91, both hemispheres 415.6
2562 Male, age 61, both hemispheres 412.7
Nucleus gracilis
nTPM: 491.9
2382 Male, age 80, both hemispheres 581.0
2627 Male, age 74, both hemispheres 466.9
2299 Female, age 85, both hemispheres 427.8
Nucleus raphe magnus
nTPM: 377.6
2459 Female, age 91, both hemispheres 448.5
2328 Male, age 80, both hemispheres 429.4
2051 Male, age 76, both hemispheres 421.8
2455 Male, age 74, both hemispheres 382.7
2160 Male, age 61, both hemispheres 301.9
2172 Female, age 85, both hemispheres 281.5
Nucleus raphe obscurus
nTPM: 631.5
2845 Female, age 85, midline 744.5
2800 Male, age 61, midline 585.2
2142 Male, age 76, midline 564.8
Nucleus raphe pallidus
nTPM: 514.3
2145 Male, age 76, midline 589.2
2183 Male, age 80, midline 480.3
1924 Male, age 61, midline 473.5
Nucleus tractus solitarii
nTPM: 295.3
2656 Male, age 76, both hemispheres 326.0
2307 Male, age 80, both hemispheres 301.1
2191 Female, age 85, both hemispheres 297.6
2144 Female, age 91, right hemisphere 256.5
Paramedian reticular nucleus
nTPM: 412.3
2057 Male, age 80, both hemispheres 435.5
2050 Female, age 85, both hemispheres 425.6
2052 Male, age 76, both hemispheres 394.9
2313 Male, age 61, both hemispheres 393.3
Parvicellular reticular nuclei
nTPM: 439.2
2119 Male, age 80, both hemispheres 483.9
2095 Male, age 76, both hemispheres 480.1
2558 Male, age 74, both hemispheres 353.5
Parvicellular reticular nuclei, medullary
nTPM: 402.6
2189 Female, age 91, both hemispheres 431.1
2181 Male, age 80, left hemisphere 393.5
2091 Female, age 85, both hemispheres 383.3
Peritrigeminal nucleus
nTPM: 464.0
2067 Female, age 85, both hemispheres 472.4
2136 Male, age 76, both hemispheres 471.0
2179 Male, age 61, both hemispheres 448.7
Pontine nuclei
nTPM: 432.6
2319 Female, age 91, both hemispheres 548.7
2454 Male, age 74, left hemisphere 527.2
2109 Female, age 72, unknown 494.3
1863 Male, age 55, unknown 420.2
1968 Male, age 76, left hemisphere 417.1
2115 Male, age 80, left hemisphere 412.3
2787 Female, age 85, both hemispheres 331.0
2727 Male, age 61, right hemisphere 310.1
Pontine raphe nucleus
nTPM: 366.0
2853 Male, age 76, midline 382.8
2122 Female, age 85, midline 349.1
Posteroventral cochlear nucleus
nTPM: 489.1
2135 Female, age 91, both hemispheres 624.9
2341 Male, age 80, both hemispheres 580.3
2070 Male, age 76, both hemispheres 433.7
2371 Male, age 61, both hemispheres 431.7
2752 Female, age 85, both hemispheres 374.8
Prepositus hypoglossal nucleus
nTPM: 464.3
2855 Female, age 85, right hemisphere 587.4
2086 Male, age 80, both hemispheres 341.2
Principal sensory trigeminal nucleus
nTPM: 414.6
2367 Female, age 91, left hemisphere 537.4
2324 Male, age 76, both hemispheres 433.3
2008 Male, age 80, left hemisphere 361.5
2158 Male, age 61, both hemispheres 326.2
Reticular pontine nucleus, caudal
nTPM: 452.5
2457 Female, age 91, both hemispheres 496.8
2559 Male, age 74, both hemispheres 492.0
2092 Male, age 76, both hemispheres 451.1
2332 Male, age 80, right hemisphere 370.1
Reticular pontine nucleus, oral
nTPM: 483.4
2366 Female, age 91, both hemispheres 570.0
1939 Male, age 80, both hemispheres 483.4
2361 Male, age 74, both hemispheres 478.7
2167 Male, age 76, both hemispheres 452.3
2012 Female, age 85, both hemispheres 432.4
Reticulotegmental nucleus
nTPM: 422.1
2322 Female, age 91, both hemispheres 494.2
2333 Male, age 80, both hemispheres 431.1
2452 Male, age 74, both hemispheres 409.0
2325 Male, age 76, both hemispheres 354.3
Spinal trigeminal nucleus, caudal
nTPM: 459.6
2312 Male, age 61, both hemispheres 536.1
2308 Male, age 80, both hemispheres 494.3
2447 Male, age 76, both hemispheres 453.5
2390 Female, age 91, both hemispheres 422.5
2642 Male, age 74, both hemispheres 391.7
Spinal trigeminal nucleus, interpolar
nTPM: 389.7
2389 Female, age 91, both hemispheres 423.6
2033 Male, age 80, both hemispheres 406.6
2386 Female, age 85, both hemispheres 394.7
2625 Male, age 61, both hemispheres 379.2
2066 Male, age 76, right hemisphere 344.4
Spinal trigeminal nucleus, oral
nTPM: 404.8
2164 Male, age 80, both hemispheres 448.0
1978 Male, age 76, both hemispheres 394.6
2737 Female, age 85, both hemispheres 371.7
Spinal vestibular nucleus
nTPM: 449.5
2806 Female, age 85, both hemispheres 512.7
2748 Male, age 76, both hemispheres 494.8
2186 Female, age 91, both hemispheres 434.5
2384 Male, age 74, both hemispheres 423.0
2780 Male, age 80, both hemispheres 420.6
2796 Male, age 61, both hemispheres 411.3
Subcoeruleus area
nTPM: 431.9
2369 Female, age 85, left hemisphere 591.5
1958 Male, age 80, both hemispheres 437.9
2089 Male, age 76, left hemisphere 413.2
2323 Female, age 91, left hemisphere 359.9
2451 Male, age 74, both hemispheres 357.0
Superior olive
nTPM: 445.3
2020 Male, age 76, both hemispheres 468.7
2329 Male, age 80, right hemisphere 460.0
2364 Male, age 74, right hemisphere 457.2
2561 Female, age 91, both hemispheres 455.8
1875 Female, age 85, both hemispheres 384.7
Superior vestibular nucleus
nTPM: 410.9
2015 Male, age 80, both hemispheres 449.8
2061 Male, age 76, both hemispheres 416.1
2383 Male, age 74, both hemispheres 367.0
Ventral medullary reticular nucleus
nTPM: 493.9
2372 Male, age 61, both hemispheres 533.5
2060 Male, age 76, both hemispheres 454.3
Ventral periolivary nuclei
nTPM: 405.2
2023 Male, age 76, both hemispheres 484.0
2165 Male, age 80, both hemispheres 411.2
2794 Female, age 91, left hemisphere 390.7
2130 Female, age 85, both hemispheres 334.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 466.2
2118 Male, age 80, both hemispheres 512.2
2180 Male, age 61, both hemispheres 500.6
2302 Female, age 91, both hemispheres 455.0
2741 Female, age 85, both hemispheres 434.9
1986 Male, age 76, both hemispheres 428.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 433.9
2456 Female, age 91, both hemispheres 494.2
2840 Female, age 85, both hemispheres 445.1
1959 Male, age 76, both hemispheres 440.3
2161 Male, age 80, both hemispheres 428.9
2359 Male, age 61, both hemispheres 398.5
2449 Male, age 74, both hemispheres 396.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 583.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 578.6
FF:10182-103D2 60 years, female 689.0
FF:10165-103B3 76 years, female 468.3
Medulla oblongata
Scaled Tags Per Million: 525.0
FF:10038-101F2 18-64 years, mixed 700.0
FF:10174-103C3 60 years, female 517.9
FF:10155-103A2 76 years, female 357.0
Pons
Scaled Tags Per Million: 583.5
FF:10033-101E6 18-54 years, mixed 583.5

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 1049.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 1049.7
Samples: 4

Max nTPM: 1412.1
Min nTPM: 586.0
Sample A Female 1088.0
Sample B Female 586.0
Sample C Male 1112.7
Sample D Male 1412.1
Pons
nTPM: 562.5
Samples: 4

Max nTPM: 968.0
Min nTPM: 308.7
Sample A Female 439.6
Sample B Female 308.7
Sample C Male 533.6
Sample D Male 968.0

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 70.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 70.1
Samples: 4

Max nTPM: 78.9
Min nTPM: 58.6
Sample A Male 70.5
Sample B Male 58.6
Sample C Female 78.9
Sample D Female 72.3

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.8
670 Antisense, RP_Baylor_102908, Mouse strain C57BL/6J (56 days, male) 2.8
671 Antisense, RP_Baylor_102908, Mouse strain C57BL/6J (56 days, male) 2.7
Pons
Expression energy: 2.3
671 Antisense, RP_Baylor_102908, Mouse strain C57BL/6J (56 days, male) 3.7
670 Antisense, RP_Baylor_102908, Mouse strain C57BL/6J (56 days, male) 3.2
672 Sense, RPS_Baylor_37014, Mouse strain C57BL/6J (56 days, male) 0.8

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