PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:1176.0 nTPM
HPA:1176.0 nTPM
FANTOM5:5816.1 Scaled Tags Per Million
Pig:2147.3 nTPM
Mouse:1357.7 nTPM
Allen mouse:21.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 1176.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 971.9
2188 Female, age 91, both hemispheres 1079.7
2301 Female, age 85, both hemispheres 978.2
2090 Male, age 80, both hemispheres 959.7
1984 Male, age 76, both hemispheres 869.9
Area postrema
nTPM: 850.2
2306 Male, age 80, both hemispheres 856.0
2054 Male, age 76, both hemispheres 855.5
2799 Male, age 61, both hemispheres 839.2
Cuneate nuclei
nTPM: 918.6
2131 Male, age 76, both hemispheres 937.8
2376 Male, age 61, both hemispheres 913.8
2381 Male, age 80, both hemispheres 904.2
Dorsal cochlear nucleus
nTPM: 949.1
2187 Female, age 91, both hemispheres 1120.6
2370 Male, age 61, both hemispheres 930.1
2802 Male, age 74, right hemisphere 919.3
2058 Male, age 76, both hemispheres 904.1
2378 Male, age 80, both hemispheres 871.5
Dorsal medullary reticular nucleus
nTPM: 989.5
2040 Female, age 85, both hemispheres 1205.9
2373 Male, age 61, both hemispheres 895.3
2088 Male, age 76, both hemispheres 867.3
Dorsal motor vagal complex
nTPM: 942.9
2133 Female, age 91, both hemispheres 1170.8
2000 Male, age 74, unknown 1019.6
2844 Male, age 55, unknown 1019.0
2643 Male, age 74, both hemispheres 954.1
2813 Female, age 72, unknown 930.3
2807 Female, age 85, both hemispheres 865.0
2185 Male, age 76, both hemispheres 807.9
2797 Male, age 61, both hemispheres 776.4
Dorsal tegmental nucleus
nTPM: 990.5
2358 Male, age 61, both hemispheres 1087.1
2083 Male, age 80, both hemispheres 1046.9
2326 Male, age 74, both hemispheres 944.8
1936 Male, age 76, left hemisphere 883.3
Dorsolateral tegmental area
nTPM: 944.1
2751 Female, age 85, both hemispheres 1047.8
2654 Male, age 80, both hemispheres 992.8
2337 Male, age 61, both hemispheres 933.3
2141 Male, age 76, both hemispheres 915.9
2360 Male, age 74, both hemispheres 830.6
Gigantocellular reticular nuclei, medullary
nTPM: 984.0
2462 Male, age 74, both hemispheres 1052.5
2387 Female, age 91, both hemispheres 1017.5
2310 Male, age 80, both hemispheres 1011.4
1876 Female, age 85, both hemispheres 984.2
2314 Male, age 61, both hemispheres 930.7
2022 Male, age 76, right hemisphere 907.7
Gigantocellular reticular nuclei, pars
nTPM: 1073.3
2168 Male, age 76, both hemispheres 1267.7
2084 Female, age 85, both hemispheres 1110.4
2336 Male, age 61, both hemispheres 1048.7
2330 Male, age 80, both hemispheres 971.9
2706 Male, age 80, both hemispheres 967.9
Inferior olive
nTPM: 954.7
2628 Female, age 91, both hemispheres 1076.1
2085 Female, age 85, both hemispheres 970.1
2563 Male, age 74, both hemispheres 967.2
2379 Male, age 80, both hemispheres 921.0
2178 Male, age 61, both hemispheres 839.0
Kolliker-Fuse nucleus
nTPM: 1061.0
2163 Male, age 80, both hemispheres 1145.0
2793 Female, age 91, left hemisphere 1103.9
2315 Male, age 76, right hemisphere 934.0
Lateral lemniscal nuclei
nTPM: 1108.3
2169 Male, age 76, both hemispheres 1296.7
2036 Male, age 80, both hemispheres 1166.0
2453 Male, age 74, right hemisphere 1045.2
2746 Female, age 85, left hemisphere 1027.8
2320 Female, age 91, left hemisphere 1005.9
Lateral medullary reticular nucleus
nTPM: 1014.5
2804 Female, age 91, both hemispheres 1133.3
2044 Male, age 76, both hemispheres 1076.4
2305 Male, age 74, both hemispheres 1051.2
2852 Male, age 80, both hemispheres 964.0
2190 Female, age 85, both hemispheres 954.0
2374 Male, age 61, both hemispheres 908.1
Lateral parabrachial nucleus
nTPM: 994.8
2139 Female, age 85, right hemisphere 1137.7
2013 Male, age 80, both hemispheres 999.1
2790 Male, age 61, both hemispheres 960.6
2792 Male, age 76, both hemispheres 881.7
Lateral vestibular nucleus
nTPM: 1082.8
2184 Male, age 76, both hemispheres 1146.8
2311 Male, age 80, both hemispheres 1018.7
Locus coeruleus
nTPM: 1101.9
2123 Female, age 91, both hemispheres 1242.0
2014 Male, age 55, unknown 1225.4
2720 Male, age 74, both hemispheres 1107.0
2788 Male, age 74, unknown 1056.3
2317 Female, age 72, unknown 1053.5
1980 Male, age 76, both hemispheres 1034.1
2162 Male, age 80, both hemispheres 995.3
Medial olivary nucleus
nTPM: 955.3
2138 Female, age 91, both hemispheres 1020.5
2851 Male, age 80, both hemispheres 974.8
1962 Male, age 76, both hemispheres 927.3
1943 Male, age 61, both hemispheres 898.7
Medial parabrachial nucleus
nTPM: 1043.9
2170 Female, age 91, both hemispheres 1232.2
2854 Male, age 80, both hemispheres 1071.0
2156 Male, age 61, both hemispheres 1045.0
2786 Male, age 76, both hemispheres 938.8
2463 Female, age 85, right hemisphere 932.6
Medial periolivary nuclei
nTPM: 1064.5
2063 Male, age 76, both hemispheres 1284.9
2171 Female, age 85, both hemispheres 1129.6
2458 Female, age 91, both hemispheres 1001.6
2081 Male, age 80, both hemispheres 957.9
2791 Male, age 74, right hemisphere 948.3
Medial vestibular nucleus
nTPM: 1087.2
2801 Male, age 74, both hemispheres 1210.0
2134 Male, age 76, both hemispheres 1147.6
2624 Male, age 61, both hemispheres 1104.1
2803 Female, age 91, both hemispheres 1070.1
2743 Female, age 85, both hemispheres 1011.0
2093 Male, age 80, both hemispheres 980.2
Motor facial nucleus
nTPM: 1054.6
2062 Male, age 76, both hemispheres 1320.7
2365 Male, age 74, right hemisphere 1049.2
2327 Male, age 80, both hemispheres 1008.4
2697 Female, age 85, both hemispheres 1007.8
2795 Female, age 91, both hemispheres 1005.2
2126 Male, age 61, both hemispheres 936.2
Motor hypoglossal nucleus
nTPM: 1078.4
2461 Male, age 61, both hemispheres 1252.9
2125 Female, age 91, both hemispheres 1139.2
2132 Female, age 85, both hemispheres 1115.4
2182 Male, age 80, both hemispheres 1024.6
2277 Male, age 76, both hemispheres 860.0
Motor trigeminal nucleus
nTPM: 1035.5
2560 Male, age 74, both hemispheres 1096.7
2321 Female, age 91, both hemispheres 1063.2
2079 Male, age 80, both hemispheres 1047.9
2335 Male, age 61, both hemispheres 1010.7
2309 Male, age 76, both hemispheres 958.9
Nuclei of the trapezoid body
nTPM: 1160.8
2159 Male, age 61, both hemispheres 1374.4
1983 Male, age 76, both hemispheres 1260.7
2735 Female, age 85, both hemispheres 1154.1
2166 Male, age 80, both hemispheres 1031.3
2368 Female, age 91, both hemispheres 983.6
Nucleus ambiguus
nTPM: 971.4
2096 Female, age 85, both hemispheres 1041.4
2071 Male, age 76, both hemispheres 901.5
Nucleus cuneatus
nTPM: 914.5
2564 Male, age 74, both hemispheres 989.0
2380 Male, age 80, both hemispheres 919.7
2805 Female, age 91, both hemispheres 912.7
2562 Male, age 61, both hemispheres 894.4
2808 Female, age 85, both hemispheres 888.8
2100 Male, age 76, both hemispheres 882.6
Nucleus gracilis
nTPM: 899.2
2627 Male, age 74, both hemispheres 980.8
2382 Male, age 80, both hemispheres 912.1
2299 Female, age 85, both hemispheres 804.7
Nucleus raphe magnus
nTPM: 1149.6
2160 Male, age 61, both hemispheres 1449.3
2172 Female, age 85, both hemispheres 1216.5
2455 Male, age 74, both hemispheres 1119.0
2051 Male, age 76, both hemispheres 1065.4
2328 Male, age 80, both hemispheres 1034.2
2459 Female, age 91, both hemispheres 1013.0
Nucleus raphe obscurus
nTPM: 987.6
2845 Female, age 85, midline 1123.2
2800 Male, age 61, midline 995.9
2142 Male, age 76, midline 843.7
Nucleus raphe pallidus
nTPM: 1016.3
2183 Male, age 80, midline 1107.1
1924 Male, age 61, midline 1066.9
2145 Male, age 76, midline 874.8
Nucleus tractus solitarii
nTPM: 899.7
2191 Female, age 85, both hemispheres 925.2
2144 Female, age 91, right hemisphere 917.2
2656 Male, age 76, both hemispheres 905.6
2307 Male, age 80, both hemispheres 850.7
Paramedian reticular nucleus
nTPM: 1084.7
2050 Female, age 85, both hemispheres 1187.0
2057 Male, age 80, both hemispheres 1107.0
2313 Male, age 61, both hemispheres 1102.2
2052 Male, age 76, both hemispheres 942.8
Parvicellular reticular nuclei
nTPM: 1046.6
2119 Male, age 80, both hemispheres 1072.9
2558 Male, age 74, both hemispheres 1039.1
2095 Male, age 76, both hemispheres 1028.0
Parvicellular reticular nuclei, medullary
nTPM: 1101.7
2091 Female, age 85, both hemispheres 1188.2
2189 Female, age 91, both hemispheres 1139.9
2181 Male, age 80, left hemisphere 977.1
Peritrigeminal nucleus
nTPM: 1056.6
2067 Female, age 85, both hemispheres 1062.7
2179 Male, age 61, both hemispheres 1055.7
2136 Male, age 76, both hemispheres 1051.4
Pontine nuclei
nTPM: 1162.2
1863 Male, age 55, unknown 1326.8
2787 Female, age 85, both hemispheres 1320.5
2727 Male, age 61, right hemisphere 1254.5
1968 Male, age 76, left hemisphere 1183.3
2109 Female, age 72, unknown 1137.6
2454 Male, age 74, left hemisphere 1075.5
2319 Female, age 91, both hemispheres 1042.6
2115 Male, age 80, left hemisphere 957.0
Pontine raphe nucleus
nTPM: 1101.5
2122 Female, age 85, midline 1182.0
2853 Male, age 76, midline 1020.9
Posteroventral cochlear nucleus
nTPM: 993.1
2752 Female, age 85, both hemispheres 1044.4
2341 Male, age 80, both hemispheres 1031.9
2135 Female, age 91, both hemispheres 998.1
2070 Male, age 76, both hemispheres 965.2
2371 Male, age 61, both hemispheres 926.0
Prepositus hypoglossal nucleus
nTPM: 996.2
2855 Female, age 85, right hemisphere 1104.6
2086 Male, age 80, both hemispheres 887.8
Principal sensory trigeminal nucleus
nTPM: 1136.8
2158 Male, age 61, both hemispheres 1341.7
2008 Male, age 80, left hemisphere 1085.8
2324 Male, age 76, both hemispheres 1072.8
2367 Female, age 91, left hemisphere 1047.1
Reticular pontine nucleus, caudal
nTPM: 1058.6
2092 Male, age 76, both hemispheres 1191.4
2332 Male, age 80, right hemisphere 1038.7
2457 Female, age 91, both hemispheres 1023.1
2559 Male, age 74, both hemispheres 981.2
Reticular pontine nucleus, oral
nTPM: 1047.3
2361 Male, age 74, both hemispheres 1156.1
2012 Female, age 85, both hemispheres 1111.7
1939 Male, age 80, both hemispheres 1023.9
2366 Female, age 91, both hemispheres 980.8
2167 Male, age 76, both hemispheres 964.0
Reticulotegmental nucleus
nTPM: 1036.2
2325 Male, age 76, both hemispheres 1148.1
2322 Female, age 91, both hemispheres 1038.2
2452 Male, age 74, both hemispheres 996.1
2333 Male, age 80, both hemispheres 962.4
Spinal trigeminal nucleus, caudal
nTPM: 1004.2
2390 Female, age 91, both hemispheres 1309.4
2642 Male, age 74, both hemispheres 959.0
2447 Male, age 76, both hemispheres 944.1
2308 Male, age 80, both hemispheres 932.7
2312 Male, age 61, both hemispheres 876.0
Spinal trigeminal nucleus, interpolar
nTPM: 1176.0
2625 Male, age 61, both hemispheres 1586.5
2066 Male, age 76, right hemisphere 1260.4
2389 Female, age 91, both hemispheres 1047.8
2033 Male, age 80, both hemispheres 1030.6
2386 Female, age 85, both hemispheres 954.7
Spinal trigeminal nucleus, oral
nTPM: 1026.0
2164 Male, age 80, both hemispheres 1113.3
2737 Female, age 85, both hemispheres 1058.2
1978 Male, age 76, both hemispheres 906.4
Spinal vestibular nucleus
nTPM: 1018.8
2186 Female, age 91, both hemispheres 1061.3
2384 Male, age 74, both hemispheres 1047.1
2780 Male, age 80, both hemispheres 1034.0
2806 Female, age 85, both hemispheres 1005.8
2796 Male, age 61, both hemispheres 1000.0
2748 Male, age 76, both hemispheres 964.4
Subcoeruleus area
nTPM: 1037.9
2323 Female, age 91, left hemisphere 1101.9
2089 Male, age 76, left hemisphere 1092.1
1958 Male, age 80, both hemispheres 1071.6
2369 Female, age 85, left hemisphere 966.5
2451 Male, age 74, both hemispheres 957.2
Superior olive
nTPM: 1050.7
1875 Female, age 85, both hemispheres 1149.0
2020 Male, age 76, both hemispheres 1129.4
2329 Male, age 80, right hemisphere 1007.9
2561 Female, age 91, both hemispheres 990.5
2364 Male, age 74, right hemisphere 976.9
Superior vestibular nucleus
nTPM: 950.3
2015 Male, age 80, both hemispheres 1055.3
2061 Male, age 76, both hemispheres 922.6
2383 Male, age 74, both hemispheres 872.8
Ventral medullary reticular nucleus
nTPM: 939.4
2060 Male, age 76, both hemispheres 954.1
2372 Male, age 61, both hemispheres 924.7
Ventral periolivary nuclei
nTPM: 1082.2
2130 Female, age 85, both hemispheres 1113.9
2023 Male, age 76, both hemispheres 1105.7
2165 Male, age 80, both hemispheres 1102.0
2794 Female, age 91, left hemisphere 1007.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1020.2
2741 Female, age 85, both hemispheres 1062.6
2302 Female, age 91, both hemispheres 1055.7
1986 Male, age 76, both hemispheres 1025.8
2180 Male, age 61, both hemispheres 1002.5
2118 Male, age 80, both hemispheres 954.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 1037.4
1959 Male, age 76, both hemispheres 1127.1
2840 Female, age 85, both hemispheres 1072.7
2449 Male, age 74, both hemispheres 1062.7
2161 Male, age 80, both hemispheres 1023.0
2456 Female, age 91, both hemispheres 977.8
2359 Male, age 61, both hemispheres 961.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 5816.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 2554.5
FF:10182-103D2 60 years, female 3210.3
FF:10165-103B3 76 years, female 1898.8
Medulla oblongata
Scaled Tags Per Million: 2550.8
FF:10038-101F2 18-64 years, mixed 3571.7
FF:10174-103C3 60 years, female 2385.1
FF:10155-103A2 76 years, female 1695.6
Pons
Scaled Tags Per Million: 5816.1
FF:10033-101E6 18-54 years, mixed 5816.1

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 2147.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 2147.3
Samples: 4

Max nTPM: 2815.5
Min nTPM: 1855.7
Sample A Female 1855.7
Sample B Female 1865.9
Sample C Male 2815.5
Sample D Male 2051.9
Pons
nTPM: 2056.0
Samples: 4

Max nTPM: 2264.1
Min nTPM: 1827.8
Sample A Female 1827.8
Sample B Female 1872.4
Sample C Male 2259.7
Sample D Male 2264.1

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 1357.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1357.7
Samples: 4

Max nTPM: 1397.8
Min nTPM: 1325.3
Sample A Male 1325.3
Sample B Male 1359.0
Sample C Female 1397.8
Sample D Female 1348.6

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 21.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 21.1
77465048 Antisense, RP_070129_03_A07, Mouse strain C57BL/6J (56 days, male) 21.1
Pons
Expression energy: 20.4
77465048 Antisense, RP_070129_03_A07, Mouse strain C57BL/6J (56 days, male) 20.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.